Candidatus Sulfidibacterium hydrothermale: LA303_04750
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Entry
LA303_04750 CDS
T07944
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00300
Lysine biosynthesis
shyr00470
D-Amino acid metabolism
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
shyr01120
Microbial metabolism in diverse environments
shyr01230
Biosynthesis of amino acids
Module
shyr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LA303_04750 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LA303_04750 (dapF)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LA303_04750 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UBM63284
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All DBs
Position
1222390..1223175
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AA seq
261 aa
AA seq
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MLLHFYKFQANGNDFVIIDEHENSFPGDEKTIARLCHRQFGIGADGLMVMRFSEKYDFLM
QYFNADGKPAEMCGNGGRSIAALAYFREVAGKIMRFEAADGVHDARIEKEISRRLFDVSL
KMQDVHEIKEWSDGWFLNTGVPHWVHFVDDLDAVDVEKQGRALRYDERFMPAGTNVNFVK
IEKEQLSVRTYERGVEGETLSCGTGVTASVLAAFLKTGKKISSVRTRGGDFQVTFEQIDE
GFQNVWLRGPAEKVFEGTIVI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcatttttataagtttcaggccaacggaaacgatttcgtgattattgacgag
cacgagaattcttttcccggtgatgaaaaaacaattgcccggctctgccaccgacagttt
ggcataggagctgacggactgatggtgatgcgtttctcggaaaaatatgattttttaatg
cagtattttaatgcggatggtaaaccggctgaaatgtgtggaaacggaggaagaagtatt
gctgcgttggcgtatttccgtgaagtggccggaaaaatcatgcgttttgaagcggctgat
ggtgtacatgatgcccggattgaaaaagaaatatcccgtcggctttttgatgtctctctt
aaaatgcaggatgtgcatgaaattaaagaatggtctgatggatggtttctcaataccggc
gtgccgcattgggttcattttgtggatgatctggatgccgtggatgttgaaaaacaaggg
cgtgctttacgttatgatgaacgctttatgcctgccggaaccaatgtgaattttgtaaag
attgaaaaagaacagctctctgtaagaacgtatgaacggggagtggaaggggagaccctt
tcgtgtggaaccggagtgacggcttccgtattggctgcttttttaaagacagggaagaaa
atttccagcgttcgtacccgtggtggcgattttcaggttacgtttgaacaaatagatgaa
ggtttccaaaatgtttggttgcgtggacctgccgaaaaggtttttgaagggacaatcgta
atttaa
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