Candidatus Sulfidibacterium hydrothermale: LA303_04885
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Entry
LA303_04885 CDS
T07944
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00020
Citrate cycle (TCA cycle)
shyr00190
Oxidative phosphorylation
shyr00650
Butanoate metabolism
shyr00720
Other carbon fixation pathways
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
shyr01120
Microbial metabolism in diverse environments
shyr01200
Carbon metabolism
Module
shyr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shyr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LA303_04885
00650 Butanoate metabolism
LA303_04885
09102 Energy metabolism
00190 Oxidative phosphorylation
LA303_04885
00720 Other carbon fixation pathways
LA303_04885
Enzymes [BR:
shyr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LA303_04885
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
HI0933_like
Thi4
NAD_binding_8
FAD_oxidored
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UBM63311
LinkDB
All DBs
Position
1258964..1260910
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AA seq
648 aa
AA seq
DB search
MTKIDSKIPEGPLAQKWTHYKEHQKLVNPANKRKIDIIVVGTGLAGGAAAASLGEMGFNV
KVFCIQDSPRRAHSIAAQGGINAAKNYPNDGDTVYRLFYDTVKGGDYRGREANTYRLAEV
SNNIIDQLVAQGVPFAREYSGYLANRSFGGAQVSRTFYARGQTGQQLLLGAYGALSKEIK
RGSVKLYTRREMLDLVIMKDGRARGIIVRNLFTGKLERYSAHAVLLATGGYGNLYFLSTN
AMTSNGSAAWRAYKRGAWFANPCYVQIHPTCIPVHGDYQSKLTLMSESLRNDGRIWVPKK
KEDAEKIRKKEIRPRDIPEEDRDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVGTGQ
AVFLDFKEAIARLGKDVIKARYGNLFDMYERITDDNPYETPMMIYPAVHYTMGGLWVDYE
LQSNIPGLFVGGEANFSDHGANRLGASALMQGLSDGYFILPYTMQNYLADQITVGTIPSD
TPEFEQAEKDVQARIEKLMSINGKETVDYFHKKLGRIMWDHAGMARNREGLEEGIKMIQE
LRKEFWENVRVPGNPNGINIELEKALRVADFLELGELLARDALHREESAGGHFREEYQTP
EGEALRNDKDFMYVAAWEYQGDDKEPKLHKEPLVYENIEVKTRNYKTA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatagattcaaaaattcctgaagggcctctcgcccaaaaatggacacattat
aaggaacatcagaaacttgtcaatcctgccaataagcgtaaaattgatattatcgtggtg
ggtaccggacttgccggaggtgctgctgctgccagtttgggcgaaatgggatttaatgta
aaagtcttttgtatccaagatagcccgcgtcgtgcacatagtattgccgctcagggtgga
attaacgctgctaaaaattatcctaacgatggcgatactgtttatcgcttgttttatgat
acggtaaaagggggtgactaccgcggacgtgaagccaatacctaccggctggctgaagtc
agtaataacattattgaccaattggtagcccagggggttccttttgcccgtgagtacagt
ggatatcttgctaaccgttcttttggtggcgctcaggtatcccgtacattttatgcccgt
ggtcaaaccggacagcagttgcttttaggtgcttacggcgctttaagtaaagaaatcaaa
cggggttctgtaaaactttatacccgccgggagatgctcgatctcgttattatgaaagac
ggtagagcccggggaattatcgtgcggaatttatttaccggaaaactggaacggtacagt
gctcatgctgtattgctggctacaggtggatatggaaatctttacttcttatctaccaat
gctatgacatctaatggtagtgcggcctggagagcttacaaaagaggggcctggtttgcc
aatccttgttatgtgcaaattcacccaacgtgtattccggttcatggcgactatcaatcg
aaattaacactgatgagtgaaagtttgcggaacgatggccgtatctgggttccgaagaaa
aaagaagatgctgaaaaaatccggaaaaaagagattcgtccccgcgatattcctgaagaa
gaccgcgattattatctcgagagaagatatcctgcttttggaaacctggttccgcgtgat
gtcgcttcgcgtgctgcaaaagagcgttgtgatgccggatatggcgtaggtacaggacaa
gcagtattccttgattttaaagaagctattgcccgtttgggtaaagatgtgatcaaagcc
cgttacgggaacctctttgatatgtacgagcggattacggacgataatccgtatgaaacc
ccaatgatgatctatccggctgttcactacaccatgggtggcctttgggttgactatgaa
ttgcagagtaatatcccgggattattcgtgggtggtgaagcgaacttctctgaccacggc
gctaaccgcttaggagcttctgctttgatgcagggattgtccgatggttattttattctg
ccttacacaatgcaaaattatcttgctgaccaaattacggtaggtactattccttcggat
acccctgagtttgaacaggcagaaaaagatgttcaggccagaattgaaaaattgatgtct
attaatggcaaagaaacggtggattatttccacaaaaaactgggacgtatcatgtgggat
catgccggtatggcccgaaacagagaaggtctggaagaaggaattaaaatgattcaggaa
ctccggaaagagttctgggaaaatgttcgtgtaccgggtaatcccaatggaattaacatt
gagctggaaaaagcactccgtgtagcggacttccttgaacttggcgagctgttggcccgt
gatgctttgcatcgggaagaatcagcaggtggccacttccgtgaagaataccaaactcct
gaaggtgaagcactacgtaacgacaaagatttcatgtatgtggcagcctgggaataccag
ggcgatgacaaagaacctaaactccataaggagccactggtttatgaaaatatcgaagtc
aaaacgcgtaactacaaaaccgcttaa
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