Candidatus Sulfidibacterium hydrothermale: LA303_05940
Help
Entry
LA303_05940 CDS
T07944
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00061
Fatty acid biosynthesis
shyr00071
Fatty acid degradation
shyr01100
Metabolic pathways
shyr01212
Fatty acid metabolism
shyr02024
Quorum sensing
shyr04146
Peroxisome
Module
shyr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LA303_05940
00071 Fatty acid degradation
LA303_05940
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LA303_05940
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA303_05940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shyr01004
]
LA303_05940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyr04147
]
LA303_05940
Enzymes [BR:
shyr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LA303_05940
Lipid biosynthesis proteins [BR:
shyr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LA303_05940
Exosome [BR:
shyr04147
]
Exosomal proteins
Exosomal proteins of breast milk
LA303_05940
Exosomal proteins of breast cancer cells
LA303_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UBM63507
LinkDB
All DBs
Position
1525579..1527495
Genome browser
AA seq
638 aa
AA seq
DB search
MTIPFLFEESVKKYPDNVLVWEKENGEYKGITFRQIQEQVYHLAAGLSAIGVEKGDRVAM
LSEGRSEWLVAELAILYLGAVNIPLSVKINEPKELSFRIKHAECRWVICSERQADKVRNI
RDDIPKAQTFIVIGRANTLSGNEKSYQDVYDNGKKIFPEWRAELETRWKSIQPGDLANIS
YTSGTTADPKGIMLTHRNYTANVEQANSLMTVTEDFVTLLILPWDHSFAHTVGLYTLIRQ
GASMAVVELGKTPMETLRNIPKNIKEIKPTFLLSVPALSKNFRKNIEAGIRAKGKVTEKL
FQQAMKVAYTYNGIGWDKGKGWRKVLKPLVQLYDKILFSKIREGFGGRLRFFIGGGALLD
IDLQRFFYAIGIPVYQGYGLSEASPVISSNSPDKHKLGSSGYLVKNLELKICDDNGKELP
VGEKGEIVIRGENVMKGYWKNETATAETIKEGWLHTGDMGYMDKDGFLYVLGRFKSLLIG
NDGEKYSPEGIEEALVEQSRYIEQCMLYNNQNAYTIGLIYPNMPALKAALKELDLTRENA
DYDKIMLELIKTDIDQFLPGGKYENMFPGRWLPAAVGIMDEPFTEENRMLNSTMKMVRNR
VVEHYKDLIDYLYSPAGKNILNERNMAAIQKLFGNKSD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcccttttttatttgaagaaagcgtaaaaaaatatcccgataatgttttggtt
tgggaaaaagaaaatggagagtacaaaggaattacttttcgccagattcaggaacaggta
taccatcttgcggcaggattgtcggcaatcggggtggaaaaaggtgaccgtgtggcgatg
ctttcggaaggacgcagcgagtggctggttgcagaactggctattctttatctgggagcg
gtaaatattcccctttctgtaaaaattaatgagcccaaagagctgtcgttcaggataaaa
catgctgaatgccgttgggtgatttgtagtgaacggcaggctgacaaggtgagaaatatc
cgggacgatattcctaaagcccaaactttcattgtgataggtcgtgccaatacgctttcc
ggcaacgagaagagttatcaggatgtgtatgataacggaaagaaaatctttccggaatgg
agagctgaactggagacacgctggaaatcaatacaacccggtgacttggccaacatcagt
tatacttccggtactacagccgatccgaaaggaattatgctgacccaccgcaattatacg
gccaatgtggaacaagccaattcgttgatgacggttacggaagattttgtgaccctgttg
atattgccctgggatcattcgtttgcacatacggtaggcctttatacgctaattcgtcag
ggggcttccatggcggtggttgaattggggaaaaccccgatggaaacactgcggaatatt
cctaaaaacatcaaagaaattaagcctacttttcttttgagcgttccggccctgtcaaaa
aatttccggaaaaatattgaagcgggcatccgggctaaaggaaaagtgaccgaaaagctg
tttcagcaggccatgaaagtggcttatacctataatggaattggttgggacaaaggaaaa
ggctggcgaaaagtgctgaaacccttggtgcagttatacgacaaaattttgttcagtaaa
attcgcgaaggttttggcggacgtctccgcttttttatcggtgggggtgccttgctcgat
atcgatttgcagcggtttttctatgccatcggaattcctgtttatcagggatatggactt
tctgaagcgtctccggttatttcatccaatagtccggataagcataaactgggttcgtcc
ggttatttggtgaaaaatctggagctgaagatttgtgatgataacggaaaagaattaccg
gttggcgaaaaaggcgaaattgttatccgtggcgaaaatgtcatgaagggatattggaaa
aatgaaacggctactgcagaaaccatcaaagaaggatggctccataccggagatatgggt
tatatggacaaggatggatttttgtatgtgctcggacggtttaaaagcctgctgattggt
aatgatggcgaaaaatacagccccgaaggtattgaagaagcccttgttgagcagtcgcgt
tacatcgaacaatgcatgttgtataacaatcagaatgcctataccatcggattgatctat
ccgaatatgccggcactcaaagccgcattaaaagagttggatctgacgagagagaatgcg
gattatgacaagattatgctggaattgataaaaacagacatcgatcagtttttgcccggc
ggaaaatatgaaaacatgtttccgggacggtggttgccggcagctgtgggaatcatggat
gaaccgtttaccgaagaaaaccgtatgctgaactctaccatgaaaatggtgcgaaaccgg
gtggtggaacattataaagacctgattgattacctgtattccccggccggaaaaaatatt
ttgaatgagcgaaacatggcggctatccaaaaacttttcggaaacaaatcggattag
DBGET
integrated database retrieval system
