Candidatus Sulfidibacterium hydrothermale: LA303_06260
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Entry
LA303_06260 CDS
T07944
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00920
Sulfur metabolism
shyr01100
Metabolic pathways
shyr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LA303_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_06260
Enzymes [BR:
shyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LA303_06260
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LA303_06260
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LA303_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
UBM63566
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All DBs
Position
1609587..1610615
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AA seq
342 aa
AA seq
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MFDSHEIEAVKQLLTNPRKVVLASHKNPDGDTIGAALAMMHYLRQKGHEVIPLVPNDYPA
YYRWLPGAEDFIVFDRDVKKLRAALADAEVLFCLDFNSLDRTGNMAPDLEKFSGKKVVID
HHLEPSDEFDHYFSVTDVSSAGELVYEFIVAMDDADRIDKNIALALYTCIMTDTGSFSYN
CNHPRTYHIVADLIERGVDAALVHKLVYDTFTENRLRLLGYALSNRLLVWKDLHTAVIYL
TKEDLKRYDYQVGDTEGLVNYGLSMQDINLAVLLTEKDNQIRMSFRSKGDFSVNRLARDF
FAGGGHKNASGGTSRIGMQNTLDKLKEVLQYFKDELDYTLTL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcccacgagatagaggcagtaaaacaactgttgaccaatccccgaaaagtc
gttttggcttcccataaaaatccggatggagataccattggtgctgcattggctatgatg
cattatttgcgccagaaaggtcatgaagttattccgttggttcccaatgattatcctgct
tattaccgttggcttccgggcgcagaagattttattgttttcgaccgggacgtgaaaaaa
ttaagggctgcccttgccgatgcagaagtgctcttttgtcttgattttaacagccttgac
cgtacagggaacatggcgcctgatttagaaaaattttcaggaaaaaaagttgttatcgac
caccatctggaaccttcggatgagtttgatcattatttctcggtgacggatgtttcttct
gccggggaattggtgtatgaatttattgttgctatggatgatgccgaccggatagataaa
aatattgcgttggctttgtacacttgtatcatgaccgataccggttcgttcagttataac
tgtaaccatccgcgtacgtatcatattgtggccgatttgattgagcgtggggtagatgcg
gctttggtccataaactggtttatgatacttttaccgaaaaccgtttgcgtttgttggga
tatgcattgagtaaccgtttattggtttggaaagatttgcataccgcagtaatttatctt
accaaagaagatttgaaaaggtatgattatcaggtaggagataccgaagggctggtcaat
tacggcctttccatgcaggatattaatcttgcggtgttattgaccgaaaaggataatcag
atccggatgtcgtttcgttcaaaaggtgatttctcggtgaaccggctggcacgtgatttt
tttgccggtggaggacataaaaatgcttccggcggaacttcccgcatcggaatgcaaaat
acgttggataagctgaaagaagttttgcagtattttaaagatgaactggattatacgctg
acgttgtaa
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