Candidatus Sulfidibacterium hydrothermale: LA303_06670
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Entry
LA303_06670 CDS
T07944
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_06670 (dinB)
Enzymes [BR:
shyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA303_06670 (dinB)
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
LA303_06670 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
DUF4332
IMS_HHH_1
Cdd1
Motif
Other DBs
NCBI-ProteinID:
UBM61110
LinkDB
All DBs
Position
1702588..1703730
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AA seq
380 aa
AA seq
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MKERTIVHLDLDSFFVSVERLANRELIGKPVIISGLSNRSVVASCSYEARRFGVHSAMPV
YMAKQLCRDAVFVRGNMERYSKYSRMVTEMIAESAPVYEKASIDEHYLDITGMDRFFGSL
SWTRALRRRIIKETGLPLSFGMSVNKTVAKIATGESKPNGELYIPSSEVKSFLFPLSVRK
IPMVGPKSYQILRSIGVTTIRALSKVPPEILMQLMGKAGPVLWKKAHGIDRSPVKPYTEK
KSVGTEHTFDFDITERLLLRSTLIAMVEKSTFELRSLGKLTGCVTVKIRYGNFDTHTLQR
VIPYTAFDHVLIEVVLDLFDRLFRYPVPVRLLGVRFSHLIGGYQQLELFDEKPELADLYQ
AMDKMRIRFGRQILKRGSGV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacggacgattgtacatttggatttggacagcttttttgtatcggtagaacgg
ctggcaaaccgtgagttaatcgggaaaccggtaattatcagtgggttgtctaaccgtagt
gtggtggccagttgcagttatgaagcccggcggtttggtgtacattcggcgatgcctgta
tatatggcaaagcagttatgccgtgatgctgtatttgtccggggcaatatggagcggtac
agtaaatactcgcggatggtcaccgaaatgattgccgaaagtgctcctgtttacgaaaaa
gcttctattgacgagcattatctggatattaccggcatggatcgttttttcggaagcttg
tcgtggacccgtgcgctgcgccggcgtattatcaaagaaacgggtttgcctttatcgttt
gggatgtcggtaaacaaaacggttgctaagatagctaccggcgaatcgaaacccaacggt
gagttgtacattccttcttcggaagtaaagtcttttttgtttccgttatccgtgcggaaa
attcccatggtcgggcctaaaagctatcagatattgcgttcgataggagttactaccatc
cgggcgctgagtaaggttccgccggaaatccttatgcaactgatgggaaaagccggaccg
gttctttggaaaaaagcccatggcattgaccggtcgccggtaaagccttataccgaaaag
aaatcggtgggaacagaacatacttttgattttgacattaccgaacggttgctgttgcgg
agtacgcttattgccatggtggaaaagagtacttttgaattgcgctcgttgggtaagctt
accggatgtgttactgtaaaaatccggtatggtaattttgacacccatacattgcaacga
gtcattccttatacggcttttgaccatgtgctgatagaagttgtattggatctttttgac
cggcttttccgttatccggtgccggttcggcttcttggcgtacgatttagtcatttgatt
ggtggttatcagcaattggaattgtttgatgagaaaccggagctggccgatttgtatcag
gcgatggataaaatgagaattcgttttggccggcaaattttgaaacgggggtcgggagtt
taa
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