Candidatus Sulfidibacterium hydrothermale: LA303_07560
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Entry
LA303_07560 CDS
T07944
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyr03016
]
LA303_07560 (truA)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LA303_07560 (truA)
Transfer RNA biogenesis [BR:
shyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA303_07560 (truA)
Prokaryotic type
LA303_07560 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
UBM61279
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All DBs
Position
1914662..1915426
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AA seq
254 aa
AA seq
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MARYFLKLAYRGTAYHGWQIQENALTVQAVFNEKISLLTGETVNVTGCGRTDTGVHARQF
FLHFDLQKELPFSENDFVFKLNRFLPADIAVYGVWKVPSDAHARFDAVSRTYRYYIALHK
DPFQYDLSMPLPGKLNIEAMQQASGYLTDYQDFTSFSKLHTQTKTNICHIQEAFWKQENG
LLIFTITADRFLRNMVRAIVGTLLEIGLGKMPPEEIRTIIEAKNRSVAGYSVPAKGLFLE
TIRYPENLEKLFNY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttattttttaaaactggcatatcgtggaacggcttatcacggatggcaaatc
caggaaaacgcactgacggtacaagctgtttttaacgaaaagatcagcctgcttaccggg
gaaaccgttaatgtaaccggatgtggccgtaccgacaccggggtgcatgcccggcagttt
tttttacattttgatttgcaaaaagaacttccattttctgaaaacgattttgtattcaaa
cttaaccggtttttgcctgccgatatcgcggtttacggtgtatggaaagtaccttcggat
gcacatgcccgctttgatgccgtgagccgtacttatcgttattacattgcattacacaaa
gatccgtttcagtatgatctttccatgcctttgcccggaaaattaaacatcgaagccatg
caacaggcttccggatacttgacggattaccaggattttaccagtttctccaaattacac
acccagacaaaaaccaatatttgtcatattcaggaagccttttggaagcaagaaaacggc
ttgttgatttttaccatcacagccgatcgctttttgcgaaatatggtgcgggcgatcgta
ggcactttactggaaatcggtctcggaaaaatgccaccggaagaaatccgcaccatcatc
gaagccaaaaaccgcagcgtagccggatattcagttcctgccaaagggctttttcttgaa
acgattcgttatccggaaaatctagaaaaattattcaattactaa
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