Candidatus Sulfidibacterium hydrothermale: LA303_08250
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Entry
LA303_08250 CDS
T07944
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyr03032
]
LA303_08250 (gyrA)
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_08250 (gyrA)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LA303_08250 (gyrA)
DNA replication proteins [BR:
shyr03032
]
Prokaryotic type
DNA Topoisomerases
LA303_08250 (gyrA)
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA303_08250 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
UBM61411
LinkDB
All DBs
Position
complement(2050621..2053167)
Genome browser
AA seq
848 aa
AA seq
DB search
MESVHEGERIVKVNIENQMKSAYIDYSMSVIVARALPDVRDGMKPVHRRVLFGMYELGVF
SNRPYKKSARIVGEVLGKFHPHGDSSVYDTMVRMAQEWSLRYPLVDGQGNFGSVDGDSPA
AMRYTEARLAKIAEEMLTDLDKETVDMQLNFDDTIYEPVVLPAMVPNLLVNGASGIAVGM
ATNMAPHNLSEIVDGIIAYIDNNDISISELMNYIKAPDFPTGGIIYGYEGVKSAFETGRG
RIVIRGKVTVEETPSGRERIIVTELPYQVNKADMIKKTADLVNEKKLDGIADINDESDRN
GMRIVYDLKRDAMASIVINKLYKMTALQSSFSVNNIALVNGRPEALNLKGLIKHYVNHRH
EVVIRRTEYNLREAEKKAHILEGLIIALDHIDEVIALIRASKTPDDARKGLVERFELSEI
QAKAILDMRLQKLTGLERDKLKTDYEELMKRIGELKEILANVELRMGIIKDELRRIKEKY
GDERCSEIVYTAEDIRMEDVIPDEPVVITISHLGYIKRTPLTEYRVQNRGGRGSRGSTTR
DEDFLEHLFVATNHNYMLFFTEQGKVYWLRVFEIPEGSKTSKGRAIQNIIQLSPDDSVKA
YINVKTLKDEEYINNNYIILATKHGTIKKTSLEAYSRPRTNGINAITIHEGDELIAARLT
NGNSEVLLALKSGRAIRFNENTVRAMGRTAAGVRGIKLASDKDEVIGMICVEDDSYDILV
VSEKGYGKRSKLEDYRVTNRGGKGVKTINITEKTGNLIAIKNVRDEDDLMIINKSGIVIR
IPVADLRVMGRATQGVRLINLKDDDEIAAVAKVEAFDELNDTEEENPENLPDENGDNSEK
ADTEEKDS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgttcatgaaggagaaagaatagtcaaggtcaacatagaaaaccaaatgaag
tcagcctacatcgattattcgatgtcggtaattgtggccagggctttacctgatgttcgt
gacggcatgaagccggtacatcgccgcgttttgttcgggatgtacgaactgggcgttttt
tccaaccgtccgtataaaaaatcggccagaatagtaggggaggttttgggtaaattccac
ccgcatggcgacagttcggtgtatgataccatggttcgtatggcccaggagtggtcgttg
cgttacccgttggttgacggacagggaaactttggatctgttgatggcgatagcccggca
gccatgcgttatactgaagcccggctggcaaagattgctgaagagatgctgaccgacctg
gacaaggaaacggtggacatgcagcttaactttgacgataccatttacgaaccggtagtg
ctgccggccatggttcctaaccttttggtaaacggtgcctccggtattgctgtgggaatg
gccaccaatatggcaccgcacaatctttcggaaattgtagacggtattatcgcttatatt
gataacaacgatatatccatcagtgaattaatgaactatatcaaagcaccggatttccct
accggcggtattatttacggttacgaaggggtaaaaagtgcttttgaaaccggtcgtggc
cggattgtgattcgcgggaaggtgacggttgaagaaaccccctcgggccgtgaacggatt
atcgttaccgaattgccttatcaggtgaataaggccgatatgatcaaaaaaacagccgac
ctggtcaatgagaaaaaactggatggcattgccgatatcaatgacgaatcggaccggaac
ggaatgcgtattgtttacgacctgaaaagagatgccatggccagcatcgtcatcaacaaa
ctgtacaagatgacggcgttgcaaagctcgtttagcgtgaataacattgcgttggttaac
ggccgtccggaagcattaaacctgaaaggactgattaaacattacgtgaatcatcgccat
gaagtggtgattcgtcgtaccgaatataatttaagggaagcggagaaaaaggcgcatatc
ctggaaggattaatcatcgcactggatcatattgacgaagtgattgctctgatccgggct
tccaaaacgccggatgatgcccgaaaaggtttggttgaacgtttcgaattgtctgaaatt
caggcaaaagccattctggatatgcgtttgcaaaaactcactggactggaaagagacaaa
ctgaaaaccgactatgaagagttgatgaaacgcattggtgagctgaaagaaattctggcc
aatgttgagttgcggatgggaatcattaaagatgaacttcgccggatcaaagaaaaatat
ggtgacgaaaggtgttccgaaattgtttatactgccgaagatatccgtatggaagatgtt
attccggatgaaccggtggtgattaccatttcgcatctcgggtacattaaacgtacgcct
ttgacagaatatcgtgtgcaaaaccggggtggacgtggttcacgcggtagcactacacgt
gatgaagattttctggaacatctctttgtggccacgaatcataactatatgctctttttc
actgaacagggaaaagtttactggctcagagtatttgaaattccggaaggctctaaaaca
tccaagggaagagctattcagaatatcattcaattgagtccggatgattcagtgaaggct
tatattaatgtgaaaacactcaaagacgaagagtatattaacaacaattatatcatcttg
gcaaccaaacacggtacgatcaaaaaaacatcgttggaagcttattcgcgtccgcgtacc
aatggaatcaatgccattaccattcatgaaggggatgagctgattgccgcccggctgacc
aatggaaacagcgaagttttgctggccttgaagtcggggagggccatccgctttaacgaa
aatacggtacgggccatgggcagaacggctgccggagtacgcggtataaagctggcttcg
gataaagacgaagttatcgggatgatttgtgtggaagatgattcgtacgatattttggtg
gtctcagaaaaaggttacggaaaacgttcgaagttagaagattatcgcgtaaccaaccgg
ggaggaaaaggagtgaagaccatcaatattaccgagaaaacaggaaaccttattgccatt
aaaaatgtgagagacgaggacgatctgatgattattaataaatcggggatcgtgattcgt
attccggtggctgatctccgggtgatgggtcgggctacacaaggtgttcgcttgatcaac
ctgaaagacgatgatgaaattgccgccgtggctaaagtggaagcttttgatgaattaaac
gatactgaagaagaaaatccggaaaatctgccggatgagaatggcgacaattcggaaaaa
gcagatacagaggaaaaagattcttaa
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