Candidatus Sulfidibacterium hydrothermale: LA303_09435
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Entry
LA303_09435 CDS
T07944
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00061
Fatty acid biosynthesis
shyr00071
Fatty acid degradation
shyr01100
Metabolic pathways
shyr01212
Fatty acid metabolism
shyr02024
Quorum sensing
shyr04146
Peroxisome
Module
shyr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LA303_09435
00071 Fatty acid degradation
LA303_09435
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LA303_09435
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA303_09435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shyr01004
]
LA303_09435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyr04147
]
LA303_09435
Enzymes [BR:
shyr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LA303_09435
Lipid biosynthesis proteins [BR:
shyr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LA303_09435
Exosome [BR:
shyr04147
]
Exosomal proteins
Exosomal proteins of breast milk
LA303_09435
Exosomal proteins of breast cancer cells
LA303_09435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UBM63638
LinkDB
All DBs
Position
complement(2329439..2331085)
Genome browser
AA seq
548 aa
AA seq
DB search
MDENLVKYFETAIKENWEKPSVSDYNGKTLTFKDVGESIQKFHLIFEKTGLKRGDKIALI
GKNSAHWAVAYLSVITYGAVIVPILPDFLPKDVHYIVTHSESKVLFSASSIWSTLDAGQM
TELKYVIGLEELMPLFSRTEHLDEVIHSLNGFMQEKFPEGLDGTKFHLPETGNDQLGEIS
YTSGTTGFSKGVMLLHNSLAANVRFARAHMPLKPGDKIVSFLPLAHAYGLAFEFLFPFSL
GCHITFLTKTPSPQIITKAFQEIRPRLILSVPLVIEKIYKKKILPVIRKSPVNWMLKTPL
LNKLIYKKVLAGVKEGFGGNFVEVVVGGAALSHEIETFFRTIGFPITVGYGMTECGPLIA
YAPAKEAKIGSCGRPVDTLEVRIDSNDPENEVGEILMRGENVMVGYYRNEEATKMVLDEE
GWLHSGDLGLMDKDGFIFIKGRSKSMILGPSGQNIYPEEIESVLNNRACVAESVVIQRDG
KLIALIYPDEEAVKSMGLTHQELEEKLEAYRKEMNKEFPAYMAISRIVVHSEPFEKTPKQ
SIKRFLYQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atcgatgaaaatcttgtgaagtattttgaaacggctatcaaagagaactgggaaaagcca
tcggtttctgattacaacgggaaaacactgacgtttaaagatgtaggagagtccatccaa
aaatttcatcttatttttgagaaaaccggcctgaaaagaggggataaaattgccctgatc
gggaaaaattcggcccattgggcggtggcttatctctcggtgattacttatggcgctgtg
atcgttcctatcttacccgactttttgcctaaggatgtacattatattgtaacccattcg
gagtcgaaagttttgttttcagcttcttccatttggagtacgctggatgcagggcagatg
acagaactaaaatatgttatcgggctggaagaactgatgccgcttttttcgcggacagaa
cacctggatgaagtaatccattcattaaatggttttatgcaggaaaaattcccggaaggt
ttggatgggacgaaatttcatttaccggaaaccggtaacgaccaactgggagaaatcagt
tatacctccggaactaccggcttttccaaaggggtgatgctgttacacaacagcctggcg
gctaatgtgcgttttgccagagcccacatgccgctgaaaccgggggataagatcgtttct
tttttgccgttggcccatgcgtatggattggcttttgagtttttgtttcctttttcgctg
ggatgtcatattacttttctgacaaaaacacccagcccgcagattattaccaaagcattt
caggagattcgtccgcggctgattttatcggtgccgctggtgatcgaaaaaatttataag
aagaaaattttaccggtaatcagaaaatcgccggtaaactggatgctgaaaacgccatta
ttgaataaattgatttacaagaaagtactggccggagtaaaagaaggtttcggtgggaat
tttgtggaagtggtagtaggtggtgcagctttgagccatgaaatagaaacttttttccgg
accatcggatttccgattacggtaggatacggaatgacagaatgtggtccgttgatagct
tatgctccggcaaaagaagccaaaatcggttcctgtggccggccggtggatacccttgaa
gtacgaattgactccaacgacccggaaaatgaagtgggagagatcctgatgcggggcgaa
aacgtaatggtgggatattatcggaatgaagaagccaccaaaatggtattggacgaagag
gggtggctgcattcgggcgatttgggcctgatggataaagacggttttatttttatcaaa
gggcggagtaagagcatgatcctcggtccgtccggacaaaatatttatcctgaagaaatc
gaatcggtgctgaacaaccgggcttgtgtggccgagtcggtagtgattcagcgtgacgga
aaattaatcgccttgatttatccggatgaagaggccgtaaaaagtatggggctgacacac
caggaactggaagaaaaactggaagcataccgtaaagaaatgaacaaggaatttccggct
tatatggcgatttcgcggattgtggtccattcagagcctttcgaaaaaacaccgaagcag
agtattaaacggtttttatatcaatag
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