Candidatus Sulfidibacterium hydrothermale: LA303_09465
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Entry
LA303_09465 CDS
T07944
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr03030
DNA replication
shyr03430
Mismatch repair
shyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA303_09465
03430 Mismatch repair
LA303_09465
03440 Homologous recombination
LA303_09465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shyr03032
]
LA303_09465
03400 DNA repair and recombination proteins [BR:
shyr03400
]
LA303_09465
Enzymes [BR:
shyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA303_09465
DNA replication proteins [BR:
shyr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA303_09465
DNA repair and recombination proteins [BR:
shyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA303_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
UBM61639
LinkDB
All DBs
Position
2335934..2336740
Genome browser
AA seq
268 aa
AA seq
DB search
MELNLKRPLAFFDIESTGLNVSKDRIIELCIIKVNPNGTTETKTWLLNPDYPISEEAQKV
HGISAEDVKDKPTFKQVAKDIHRFLANCDLAGYNSNRFDIPMLVEEFLRAGVDFEVENRR
FIDVQNIFMKMEPRTLKAAYRFYLQKELENAHSATADVQATYEILKAQLDRYADTTYTDK
EGETDTPVKNDVDALARFSTHHRNADMMGQIIYNEKGEEVFNFGKHKGKTVEEVFRKEPS
YYDWMQKADFPLYTKKLLTKIKLRMLGK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaacctgaaacgcccccttgcctttttcgatatcgaaagcaccggactcaat
gtatccaaagaccgcatcattgagctttgcattatcaaagtcaaccccaacggcaccacc
gaaaccaaaacctggctgctcaatcccgattatcccatttcggaagaagcccaaaaagtt
cacggcatttcagccgaagatgtcaaagacaaacctacgttcaaacaggtagcgaaagat
attcaccgttttcttgccaactgcgaccttgccggctacaactccaaccggttcgatatt
cccatgctggtggaagagtttttgcgcgccggcgtggacttcgaagtggaaaaccgccgt
ttcattgacgtacaaaacatttttatgaaaatggaaccccgcaccctgaaagccgcctac
cgcttttacctgcaaaaggaactcgaaaacgcccattcggccaccgccgacgtacaggct
acttacgaaattctgaaagcccagctcgaccgttacgccgacacaacttacaccgacaaa
gaaggagaaaccgataccccggtaaaaaacgatgtggatgccctcgcccggttctcaacc
caccaccgcaatgctgatatgatgggacaaatcatctacaacgaaaaaggcgaagaagtt
tttaattttggcaaacacaaaggcaaaaccgtggaagaagtcttccgcaaagaaccgtca
tactacgactggatgcaaaaagccgacttcccgctctataccaaaaaactgctcaccaaa
atcaaactgcgcatgctcggaaaataa
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