Candidatus Sulfidibacterium hydrothermale: LA303_09495
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Entry
LA303_09495 CDS
T07944
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00061
Fatty acid biosynthesis
shyr00071
Fatty acid degradation
shyr01100
Metabolic pathways
shyr01212
Fatty acid metabolism
shyr02024
Quorum sensing
shyr04146
Peroxisome
Module
shyr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LA303_09495
00071 Fatty acid degradation
LA303_09495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LA303_09495
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA303_09495
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shyr01004
]
LA303_09495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shyr04147
]
LA303_09495
Enzymes [BR:
shyr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LA303_09495
Lipid biosynthesis proteins [BR:
shyr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LA303_09495
Exosome [BR:
shyr04147
]
Exosomal proteins
Exosomal proteins of breast milk
LA303_09495
Exosomal proteins of breast cancer cells
LA303_09495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
CRLF2-like_D2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UBM61644
LinkDB
All DBs
Position
complement(2341644..2343338)
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AA seq
564 aa
AA seq
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MEKKDWFGFYGDVPHSLHYPEGSLYQLLKKSIDEHPHAVAYDFLDKTATYTELGKQIDAL
ACQFHKAGFRRGDTMSIIMPTSPQGILAFYAVNKLGGVAAFIHPLSTEEELKHYLTLSQS
RFALTLDIFYEKIAHIKNEVPLEKLFVTHISDYMPPVKKLAYRLITLPKRVKTDKTWTLW
LEKTAAACEKPVSTANMESDALAVILFSGGTTGVPKGVMLTNKNIVSEGMMVAAWGKLDE
SDTILAILPIFHGFGLSVCVNAALLAGAKTVLIPKFTVKDVARLIKKKKPTFLIGVPTLF
KALLDEKSFRNSDLSFLKMSFSGADTLPRNLKEAFDETVRKNGGKSVLLEGYGLTEAVTA
IMALPAHEYREGSIGLPFPDMDVKIVDPESYQEMPHGEIGEIVIHGPAVMKGYLNNPEET
AATLKVHDDGEIWLHTGDLGYRDADGFFYFKQRLKRMIKSSGMNVYPSEVENVICQHEDV
KFACVIGVEDAHQMTRIKAFVELHHPEVAGREKEEEIIAFVRKRLIKWSCPREIEFMEKL
PLTKIGKVDFRKLEEIEYAKQKGH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagactggtttggattttacggtgatgtgccgcatagcctgcattatccc
gaaggatcgctttaccaattactgaaaaaaagtattgacgaacatcctcatgccgtagct
tacgattttttagacaaaacggccacttataccgagttggggaaacaaattgacgcgttg
gcctgtcagtttcataaagccgggtttcgcaggggcgataccatgagcattattatgcct
acgtcaccacagggaatcctggcattttatgccgtgaataaactgggcggtgtggctgcc
tttatccatccgctttccacagaggaagaattaaaacattacctcacgctgagccaatcc
cgttttgcgcttacactggatatcttttatgaaaaaatagcccatatcaaaaatgaagtt
ccactggaaaaactttttgttacgcacatctccgattatatgccaccggttaaaaaactg
gcttatcgtctgataactcttccgaaaagggtgaaaacagataaaacatggacactgtgg
ttggaaaaaacagcagcagcctgcgaaaagcctgtgtctacagcgaacatggagagtgat
gcgcttgccgtcattttgttcagtggaggtacaaccggtgttcccaaaggcgtcatgctt
accaacaaaaacattgtgtcggaaggaatgatggtggctgcctggggaaaactggatgaa
tcggataccatactggctattttgcccatttttcacggcttcgggctgagtgtgtgcgta
aatgccgctttgttggccggcgccaaaacggtactgattcctaaatttactgtgaaagat
gtagcccggttgattaagaagaaaaagccgacttttctcattggtgtacccacgctgttt
aaagccctgctggatgagaaatcgttccgtaattccgatttgagtttcttgaaaatgtct
ttttccggtgccgatacgttgccgcgtaacctgaaagaagcctttgacgaaactgttcgg
aaaaacggcggaaaatcggtgctgcttgaaggttatggacttaccgaagcggtgacggct
atcatggcgctgccggcacacgagtaccgcgaaggttccatcggactgccgttccccgat
atggatgtgaaaattgtggatccggagagctatcaggaaatgcctcacggcgaaatcgga
gagatcgtcatccacgggccggcggtgatgaaaggctatctgaacaatccggaagaaacg
gctgctacactgaaagtacatgacgacggggaaatatggttgcataccggcgatttgggt
taccgtgatgccgatggctttttctatttcaaacaacgcctgaaacgcatgattaaatct
tcgggaatgaatgtctatccttcggaagtggaaaatgtgatttgtcagcacgaagatgtg
aaatttgcctgtgttatcggcgtggaagatgcgcatcagatgacccgtatcaaagctttt
gtggagttgcatcatccggaagtggccggcagggaaaaagaagaagagatcatcgccttt
gtgcgaaaacggttgataaaatggagctgtccgcgcgaaatcgaatttatggaaaaatta
cctttgaccaagataggaaaagtggattttagaaaactggaagaaattgaatatgcaaaa
caaaaaggtcattaa
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