Candidatus Sulfidibacterium hydrothermale: LA303_09970
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Entry
LA303_09970 CDS
T07944
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr02024
Quorum sensing
shyr03060
Protein export
shyr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LA303_09970 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LA303_09970 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA303_09970 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shyr02044
]
LA303_09970 (secDF)
Secretion system [BR:
shyr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LA303_09970 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UBM61730
LinkDB
All DBs
Position
complement(2430994..2434149)
Genome browser
AA seq
1051 aa
AA seq
DB search
MQNKGAIKFFAIAFGLVCLYQLSFTYVAARVEKKAKAYAHNKEAVRLAKELAKGNEAKEV
YYLDSIAKAREKYYLDSVNNEVVYNLGIGKYTYKQVKERELNLGLDLKGGMNVVLEVKVQ
DIVDALAGHSKDPAFRKAMKLATEMQKHSNKDFVTLFGEAFHKVDPNGRLASIFLYEFKD
KGITTTSSNAEVLKVLKKETDGAVDRTFQILRTRIDRFGVAQPNIQKLATSGRILVELPG
IKDPERVRKLLQGTAKLQFWETYSFADIHTYFDEANAKLRAEENLLSDSTKTAASQKATA
TGNKTTKAVSDTATNSLLNKIAKDTTKGQNENASFSTYAKKNPLYAYLHPSYIQGKDGRY
YPANTARVGLVAIKDTARVNRMLKMVKNIFPRDLKLAWAVKPDPHTPNYLALIALKASSR
DGSAALGGDVISDARQDFDQNGRVTVDLQMNSEGAKIWKRLTGENIGKQIAIVLDGYVYS
YPVVNDQIPNGRSSISGGGMTVEEAKDLANILKAGKLPAPAKIVEEAVVGPSLGREAVRA
GMNSFILAFIVVLVYMIVYYNKAGWVASLALIVNVFFLLGVLASLGAVLTLPGIAGIVLT
LGMAVDANVIIYERIKEEMRAGKGLRLALTDGYRNAYSAIIDGNVTTLLTGVVLYVFGTG
PIQGFATTLIIGLLSSLFTAIFISRIIFEGMLKKNKKITFSYKWTANTLSNTHFDFIGMR
KKAYIFSGTLILVGLISLFTKGLNFGVDFTGGRTFVVRFDQNVNTEAIRKALTAEFDNQA
PIVKTFGPDNQIKIVTKYLIDDNRDNVDSILQTKLYNGLKKFYKKPISFKAFTSDTEGEN
KLLGILSSQKFGPTIAYDIREKAYFAIFFALLIIFIYVAIRFKNWQYGVGGVAALFHDTL
ITIGVFSLFNGIMPFSMQVDQSFIAAILTIIGYSINDTVIIFDRIRENVNLFPRHTLKRN
MNEGLNQTLARTMNTSGTTLVVLLVIFIFGGEVIRGFVFALLVGITIGTYSSVFTASPIA
YDLLHGAREDKKIEEREAKMNQKKAKSKKKK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggagctatcaagttttttgctattgcctttggcctggtatgcctgtat
cagctgagttttacgtatgtggcagcccgggtggagaaaaaagcaaaggcttatgcacac
aacaaagaggcggtccgtctggcaaaagagctggctaagggaaatgaagccaaagaagtg
tattatcttgattcaattgccaaagcacgtgagaaatattatctcgacagtgtgaataac
gaagtggtgtacaacctgggcattggaaaatacacttacaaacaggtaaaagaaagagag
ctgaaccttggccttgacctgaaaggcggaatgaacgtagtgctcgaagtaaaagtgcag
gatattgttgatgcacttgccggccatagtaaagacccggctttccggaaagccatgaaa
ctggctaccgaaatgcaaaaacacagcaataaagactttgttacgctttttggagaagct
tttcataaagtggatcccaatggtcgcctggcttccatttttttgtatgaatttaaagat
aagggaattacaaccacatcgtccaatgctgaagtactgaaagtgctgaaaaaagaaacc
gatggtgcggtggatcgtactttccagattttgcgaacccgtattgaccgttttggggta
gcccagccgaatattcagaaactggctaccagcggacgtattttggtggagcttccggga
attaaagatcctgaacgggtgcggaaactgctgcagggaaccgcaaaactccagttttgg
gaaacatatagcttcgcagatattcacacttattttgatgaagccaatgctaaactgcgt
gcagaagaaaacttactgtccgattctactaaaacggcagcttcgcaaaaagcaacggca
accggaaataaaacgaccaaagccgtttcggatacagctacaaacagcttgctgaacaaa
attgccaaggatactaccaaaggacaaaatgaaaacgcttctttttctacgtatgcaaag
aaaaatccgttatatgcttatttgcatccgtcctatattcagggaaaagacggccgttac
tatccggccaacacggcccgtgtgggattggtagccattaaagatacggcccgtgtgaac
cggatgctgaaaatggtgaaaaatattttcccgcgtgacctgaaactggcctgggcggtt
aaacccgatccgcatacgccgaattatttggctttaattgcattaaaagccagttcacgt
gacggaagtgcagcccttggcggtgatgtgatctctgacgcccgtcaggattttgaccaa
aacggccgggtaacggttgacctgcagatgaacagcgaaggggctaagatatggaaacgg
cttaccggtgaaaatattggtaaacaaattgccattgttcttgatggttatgtttactct
tatccggtggttaacgatcagattcccaacggacgttcttctatttccggtgggggcatg
acggtagaagaagccaaagacctggcaaatattctgaaagccggtaaattgcctgctccg
gccaaaattgtggaagaagccgtggtgggtccttctttgggacgcgaagcggtacgtgcc
ggtatgaacagctttattttggctttcattgtggtgctggtttatatgatcgtgtactac
aacaaagccggttgggtagccagtttggctttgattgtcaacgtatttttcttgttaggc
gtgctggcctcactgggtgcggtactgacgcttccaggtattgccggtattgtgctgacg
ctaggtatggcggtggatgctaacgtaattatttacgagcgtattaaagaagaaatgcgg
gcaggaaaaggactacgccttgcattgaccgacggatatagaaatgcttattcggctatt
atcgacggtaacgtgaccacgttgctgaccggtgtagtattgtatgtgtttggtaccggt
cctattcagggatttgctaccaccttgattatcggtctgctttcgtctctctttaccgct
atcttcatctcccgtatcatctttgaagggatgctgaagaaaaacaaaaagattaccttc
tcttataaatggacggcgaataccctttcgaacacccatttcgattttatcgggatgcgg
aaaaaagcctatatcttctccggaacactgattttagttggtttgatttcattatttacc
aaagggctgaactttggggttgacttcaccgggggacgtacttttgtggtgcgctttgac
caaaatgtaaatactgaagccatccggaaagcccttacggctgaatttgacaaccaggct
ccgattgtgaaaacgtttggtccggataaccaaataaaaattgtcaccaaatatttgatc
gatgataaccgtgacaatgtggattctatcttacagaccaaattgtacaacggcctgaag
aaattctataaaaaaccgatctcatttaaggcatttacttcagatactgaaggagaaaac
aaattactgggtattttgagctcgcaaaaatttgggccgacgattgcttacgacattcgg
gagaaagcctattttgcgatcttctttgcgctgctcatcatctttatttatgttgccatc
cggtttaaaaactggcaatatggcgtgggaggtgtggccgcgttgttccacgatacctta
attacgataggggtcttctcgttgtttaacggtattatgccctttagtatgcaggtggac
caatcgtttatagcagctattttgaccatcatcgggtactccattaacgatacggtaatt
atctttgaccgtattcgtgaaaatgtgaaccttttcccgcggcatacgttgaaacgaaat
atgaatgaaggtttgaaccagactttggcccgtacaatgaatacatcaggtactacgtta
gtggtattgttggtgatctttattttcggtggagaagtcattcgtggtttcgtgtttgct
ttgctggtagggattaccattggtacttattcttcggtctttacggccagccccattgca
tacgacctgctgcatggtgcccgcgaagacaagaaaattgaagaaagggaagccaagatg
aatcagaaaaaagcaaaatcgaaaaagaaaaaataa
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