Candidatus Sulfidibacterium hydrothermale: LA303_10320
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Entry
LA303_10320 CDS
T07944
Name
(GenBank) dCMP deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00240
Pyrimidine metabolism
shyr01100
Metabolic pathways
shyr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LA303_10320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shyr02044
]
LA303_10320
Enzymes [BR:
shyr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LA303_10320
Secretion system [BR:
shyr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LA303_10320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
APOBEC_N
Bd3614-deam
APOBEC2
APOBEC4_like
NAD1
APOBEC3
AID
APOBEC1
NAD2
XOO_2897-deam
Motif
Other DBs
NCBI-ProteinID:
UBM61799
LinkDB
All DBs
Position
complement(2513597..2514025)
Genome browser
AA seq
142 aa
AA seq
DB search
MGKKSAKFDKSYLEMAHVWAKNSYCKRRQVGALIVKDRMIISDGYNGTPSGFENVCEDET
GTTKQYVLHAEANAITKVAQSNNSSKGATLYVTDSPCIECSKLIIQAGISRVVYDRKYRI
TDGLDLLRRAGVDVEQLNISGE
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaaagtgcaaagtttgataaaagttatttggaaatggcccacgtgtgggca
aaaaattcgtattgtaaacgtcggcaggtgggggctctgatcgtaaaagaccgtatgatt
atttcagatggttacaacggaaccccttcggggtttgaaaatgtatgcgaagatgaaacc
ggaacgaccaagcaatatgttttacatgccgaagccaatgccatcaccaaggtagcccaa
tcgaataacagcagcaaaggagctacgttatatgtaactgattcgccttgtattgaatgt
tccaagctgattattcaggcaggaatcagccgggtggtatatgacagaaaataccgtatt
actgatggcttggatttgttgcgtcgtgcaggcgttgatgtagagcagctcaatatttcc
ggagagtaa
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