Candidatus Sulfidibacterium hydrothermale: LA303_10955
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Entry
LA303_10955 CDS
T07944
Name
(GenBank) PAS domain S-box protein
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
Response_reg
PAS
HATPase_c
HisKA
PAS_4
PAS_3
GAF_2
PAS_8
GAF
GAF_3
PAS_12
PAS_13
Motif
Other DBs
NCBI-ProteinID:
UBM61920
LinkDB
All DBs
Position
complement(2672770..2676081)
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AA seq
1103 aa
AA seq
DB search
MNRKLKILLLEDNASDVKLLKRALSRSFDAFTLKVIERKEEYLAELLQDYDIVISDFALP
AFDGMEALKIKNKERPFMPFIITTGSTNEDTAVQCMKEGADDYIIKEHITRIGEAVKRAI
ALKKAEYDRQKAFETVQHLNRTLKAIRNINQLITREHDVQKLIQQACEMFTQEQSYRAAW
IALFDEKGNLGKVNAYSGFSAKAFSPLAKGMLRGEWPACLKMASEEKGMVHILLSDTSKK
DCPFARLKLSSSAFCEMLEYNNKKLGFITVSIPDDVEVNHEEKELFRQVASDLAYALFNL
EVEKENRENALRQQVLYQIAHAAVLEGDLTSFLVKVYDIIKQVVDFDHAYIALYDEEHHQ
YTFPFKKGILSGFHMDALPDSRKGLIYYVRKKQKLIRVNNDQIRELVKKGEVEIIGPLST
SWMGVPLTHKNRFIGVLVLIHQTNLQAFSEKDEELMRFISNQLALFIERKEALKALRVSN
KRYKTLMQQASDSILLCDMEGKIVEVNEKIEKSLGYASQEILSMNAFDLLPPSLAEIQKK
KYWDYFSPGKIIKFETIFRRKDHSEFPVEISAGVVHIGDKDLVLAIARDISERKRTEERI
QLLSLGVEQSPASIVITDKEGNIQYVNKKFTEVSGYSLDEVLGKNLRILKSGKMPDRIYT
ELWNTITAGEEWRGEMINRKKDQSLFWELVSISPVKNNDGEITHFIAVKEDITSRKEMEA
ELRKAKQKAEESNRLKSEFLANMSHEIRTPMNGIIGFASLLEDEDLTAESRKNYVQIIQN
STRQLLHIIDEILEVSRLQTRQVEKSSAEVNINELLMSCFSEFDRVAKEKSLSIYLKKGL
PDEVALVYIDGGKLHKVIHHLVENALKFTQEGYIELGYRLKGKDRLEFFVKDTGIGIGSN
AREMIFDEFSQEDKRLSRLSGGLGLGLSIVKGYVDLLGGTIRIESEKGKGSVFYVEIPYV
PVHPEKLNLLPEPSSDTAAVTVLVAEDEEVNYQYLEILLRKFNPDIVVQHAVTGEDAVKA
CRDNPDISLVLMDLKMPGMNGLEATRKIKAQNPNIIIVAQTAYTAPENQQEAKKAGCDSF
LRKPTRKANLFKVLNKYLTTRKR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggaaactaaaaatattgttacttgaagataatgcctcggatgtaaaattattg
aaaagagcattatcgagaagttttgatgcctttaccctgaaagttattgagcggaaagaa
gagtatctggctgaattgcttcaggattatgatattgtgatttccgactttgctcttcct
gcttttgatgggatggaagccctgaaaattaaaaataaggaaaggccctttatgcctttt
attattactaccggttccactaacgaagatacggctgtgcaatgtatgaaagaaggggcc
gacgattatattatcaaagagcatattacccgtattggggaagccgtaaaacgggctatc
gcccttaaaaaagcggaatatgaccggcaaaaagcttttgaaacggtgcaacatcttaac
cggactttaaaagcaattcgaaacattaatcagctgataacccgtgagcatgatgtgcaa
aagctgattcagcaagcatgtgaaatgtttacacaggaacagagttaccgcgcagcctgg
atcgctctgtttgacgaaaaaggaaatctgggaaaggtaaatgcttattccggtttttca
gcaaaagctttttctccgcttgccaaaggaatgctccggggtgaatggcctgcgtgtttg
aaaatggcatcggaagagaaaggaatggtacatattctcctttcggatacatcaaaaaaa
gactgcccttttgcccgcctgaagttgtcttcttctgctttttgtgagatgctggagtac
aataacaaaaagctgggatttatcaccgtaagtattccggatgatgtggaggtgaatcac
gaagaaaaagagcttttccggcaggtggccagtgatttggcttatgccttgtttaatttg
gaagtggagaaagaaaaccgtgaaaatgctctccggcagcaggttttgtatcagattgcc
catgctgccgtgctggaaggcgatttgaccagttttcttgttaaggtttatgatattatc
aagcaggttgtcgatttcgatcatgcatatattgccctttatgatgaagaacatcatcaa
tacacttttccttttaaaaagggtattctctcgggatttcatatggatgctttgcctgat
tcccggaaaggattaatttattatgtccgtaaaaaacaaaaattgatccgtgttaacaac
gatcaaatcagggagttggtcaaaaaaggagaagtggagatcatcggtcctttatctacc
tcctggatgggggttccgcttacccataaaaaccggtttattggggtgttggtgcttatt
catcagactaatcttcaggctttttctgaaaaagatgaagagttgatgcggttcatttcc
aatcaactggcattgtttatcgaacgaaaagaagccttaaaagctttgagggtaagcaat
aaacggtataaaaccctgatgcaacaagccagcgattccatcttgttgtgcgatatggaa
ggaaaaatagtggaggtaaacgaaaaaatagaaaaaagtttgggatatgcttcgcaggaa
atcctgtccatgaatgcttttgatctattgccgccatctttagctgaaatacaaaagaaa
aagtactgggattatttttctccggggaaaatcataaaatttgaaacgatctttcgccgg
aaagaccattctgagtttccggtggaaattagtgccggggtggtacatattggcgataag
gacttggtgctggccattgcccgcgatatcagcgaacgtaaaagaacggaagaaagaatc
cagttgctctcgctgggggtggaacagagcccggcttccattgtaattactgacaaggaa
gggaatattcagtatgtgaataagaaatttactgaagtaagcggttattctttggatgag
gtactggggaaaaacctgcggattttaaaatccggtaaaatgcccgaccggatttatacg
gaattgtggaataccattaccgcaggtgaagagtggcgtggcgagatgatcaaccgaaag
aaagaccaaagtctgttttgggagctggtcagtatttctccggtgaaaaataatgatgga
gaaattacgcattttattgcggtgaaagaagatatcacctcgcgtaaagagatggaagct
gaactgcggaaagccaaacagaaagcagaggagagcaaccggctgaaaagtgaatttttg
gccaatatgagccatgagatccgtacacccatgaacggaattatcgggtttgcttctttg
ctggaagatgaagacctgactgcagaatcacgcaaaaactacgtgcagattattcaaaac
agtacccggcagttgcttcatattattgatgagattttggaagtgtcacgattgcagacc
cgtcaggtggagaaatccagtgccgaagtcaatatcaatgaattgctcatgagttgtttc
tctgagtttgaccgggtagccaaagaaaaatcattatcgatttatctgaaaaaaggattg
cctgacgaagtggcattggtttatatagatggcggaaagttacataaggtcattcatcat
ctggtggaaaatgcactgaagtttacccaggaaggttatatagaactgggctatcggttg
aaaggaaaagaccggcttgaattttttgtgaaagataccggaatcggtattggaagcaac
gcccgtgagatgatctttgatgaattttcgcaggaagacaaacggctttcgcgtttgtct
ggcggacttggcctggggctttctattgtaaaggggtacgttgatctgctgggaggaacg
attcgcattgagtcggaaaaaggaaaaggttcggtgttttatgtggagatcccgtatgtt
cctgtacatcctgaaaaattgaatttgttaccggaaccttcttccgatacggcagccgtt
accgtgctggtggcagaagatgaagaagtaaattaccagtatctcgagattttgctcaga
aaatttaatccggatattgttgtgcaacatgccgttaccggtgaggatgctgtaaaagcg
tgccgtgacaatccggatatcagtttggtattaatggatttgaaaatgccgggaatgaac
gggttggaagcgacacggaaaatcaaagcccagaatccgaatatcatcattgttgcccaa
acggcttatactgcaccagaaaatcagcaagaagcaaaaaaagcgggctgcgattctttt
ttacgaaaaccaacccgtaaagctaacctgttcaaggtgttgaataaatacctgacaacc
agaaaacgatag
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