Candidatus Sulfidibacterium hydrothermale: LA303_11225
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Entry
LA303_11225 CDS
T07944
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shyr03009
]
LA303_11225 (der)
Ribosome biogenesis [BR:
shyr03009
]
Prokaryotic type
GTPases
LA303_11225 (der)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
SRPRB
Arf
PduV-EutP
Ras
ABC_tran
AAA_22
Gtr1_RagA
TniB
cobW
AAA_18
SRP54
Motif
Other DBs
NCBI-ProteinID:
UBM61970
LinkDB
All DBs
Position
complement(2731205..2732515)
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AA seq
436 aa
AA seq
DB search
MNNIVAIVGRPNVGKSTLFNRLTGSKTAIVESVSGVTRDRIYGKSDWNGKEFSVIDTGGF
VQGSDDIFEEEIRKQVLFAIDEADVIIFVVDAREGIHPLDEDVAELLRRSSKKVFIAANK
VDTPALSHAAADFYALGLGEVYPISSVNGSGTGDLLDEMVKEFRNPEPEPETPDVPRIAV
IGRPNVGKSSLINTLIGDTRNIVTPIAGTTRDTVYTPFKGFGHDFMLVDTAGLRKKGKVY
ENIEFYSTLRTIRAIENADVCLVMIDASQGIEKQDVNIFHLAEKNRKGIVIVVNKWDLVE
KDNNTHLEYEKAIRQRIAPFNDVPIVFVSVKDKQRVFKALNYAEEVFQKRSKRISTSKLN
DLLLPIIEENPHPMVSRGRYVRIKYVMQLKTQTPQFVFFCNLPDEVKDPYKRFLENKIRQ
HFDFTGVPIQLFFRQK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataacattgttgccattgtcggccgcccaaatgtggggaaatccacgttatttaac
agattaacaggttctaaaacggctattgtagagtcggtgagtggtgtaacacgcgaccgt
atctatggaaaaagtgattggaacggaaaagagttttcggtaattgataccggcggcttt
gttcagggatcggatgacatttttgaagaggaaattcgaaaacaggtattatttgccata
gacgaagccgatgtcattatttttgtggtggatgcccgtgaggggattcatccgctggat
gaagatgtggccgaattgttacgccgttcgtccaagaaagtttttattgcggccaataaa
gtagatactccggctttgtcacatgctgcggccgatttttatgctttaggattgggagaa
gtgtacccgatttcttctgtcaacggaagcggaaccggagatttgctggatgaaatggta
aaagagttccggaatccggaaccggagccggaaaccccggatgttccgcgtattgcagtg
attggtcgccctaatgtgggaaagtcgtcactgatcaataccctgattggtgacacccga
aatattgttactccgattgccggtaccacccgcgataccgtttatacaccgtttaaaggt
tttgggcatgactttatgctggtggatacggccggattgcgaaaaaaggggaaagtttac
gaaaatattgagttttactcgacactccggaccattcgagccattgagaatgccgatgtt
tgtttggtgatgattgatgcttcgcagggaatagagaagcaggatgtgaatatttttcat
ttggcagagaaaaaccggaaaggtattgtgattgtggtgaacaagtgggatttggtagaa
aaagacaacaatacccatttggaatatgaaaaagccattcggcaacggattgcgccgttt
aatgatgttcctatcgtgtttgtttcggtaaaagataaacagcgggtttttaaagcattg
aattatgctgaagaggtgtttcaaaaacgaagtaagcgaatttcgacttcgaagctgaat
gatttgttgttgccgattattgaagaaaatccgcatcccatggtttcgcgtggtcgttat
gtgcgaatcaagtacgtgatgcagcttaaaacgcaaacgcctcagtttgtatttttctgc
aatttacccgatgaagtaaaagatccgtataaacgattcctggaaaacaagatccggcag
cattttgattttactggcgttccgattcagttgtttttcagacaaaaatag
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