Candidatus Sulfidibacterium hydrothermale: LA303_11320
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Entry
LA303_11320 CDS
T07944
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00300
Lysine biosynthesis
shyr00470
D-Amino acid metabolism
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
shyr01120
Microbial metabolism in diverse environments
shyr01230
Biosynthesis of amino acids
Module
shyr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LA303_11320 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LA303_11320 (lysA)
Enzymes [BR:
shyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LA303_11320 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DNA_pol_B_2
HV_small_capsid
Motif
Other DBs
NCBI-ProteinID:
UBM61986
LinkDB
All DBs
Position
complement(2750238..2751446)
Genome browser
AA seq
402 aa
AA seq
DB search
MFNKALYQYFLQVETPFYFYDISLLHKSLDNLTRAAGKYDYHIHYAIKANANDRVLQIIK
DYGLGADCVSGNEVKKAVEMGIPSEKVVFAGVGKSDAEIIYAIDQSIFSFNCESIEEIEV
INEWGRKKQKVVPVSLRLNPDIDAITHKYLTTGLPENKFGIPLQFLDRVIRRVNSLSHIQ
LIGLHFHIGSQIRELAPYIELCEKVNSIQDIIYKKHGLLLEHINLGGGLGINYEDPDAEP
IPDFEHFFDTIHEHLKVREGQKVHFELGRSVVGQMGSLISKVLYIKKGLNKEFMILDAGM
TDLIRPALYGAQHKIQNISRPGAQIKNYKYDVVGPVCETSDSFDDDVMLPKTKRGDLVAI
RSTGAYGEIMVSQYTLRNKPKAVYSDEIRTASGNPLVIDEIV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaacaaagcattatatcagtattttttgcaggtggaaacgcccttttatttttat
gatatatccttgctacacaaaagtttagataacctcacccgtgcagccggaaaatatgac
tatcatattcattatgcgattaaagcaaatgccaatgatcgggtgctgcaaatcattaaa
gattacggactgggtgccgattgtgtcagcggaaatgaagtgaagaaagcagtggaaatg
gggattccgtccgaaaaagtggtttttgccggtgtgggaaaaagcgacgcagaaattatt
tatgccatcgatcaatcgattttcagttttaattgtgaatcgattgaagagatcgaagtg
attaacgaatggggccgtaaaaaacaaaaagtggtcccggtttcccttcggttaaatccg
gatattgatgccattacgcataaatatctcacaacgggtttgccggaaaacaagttcgga
attccacttcagtttcttgaccgggttatccggcgggtcaacagcctttcgcatatccag
cttatcggtttgcattttcatatcggttcacaaatcagggaactggctccgtatattgaa
ttgtgcgaaaaagtaaacagcattcaggacattatttataagaaacacggtttgttgctt
gagcatattaatttaggcggtggactgggaatcaattatgaagatccggatgctgagcct
attcccgattttgaacattttttcgatacgattcatgagcatctgaaagtacgcgaagga
caaaaggttcattttgaactgggacgctcggtagttggccaaatgggcagcttgatttct
aaagtgctgtacataaaaaaaggactgaataaagagtttatgatactggatgccggtatg
accgatcttatccggccggcgttgtatggagcacaacataaaattcagaatatctccaga
ccgggagcgcagataaaaaattataaatatgatgtagtgggaccggtttgtgaaacttct
gatagctttgatgatgatgtaatgcttccgaaaaccaaaagaggcgatcttgtggctatc
agaagtacgggagcctatggggaaataatggtatcacaatatactttacgaaataaaccc
aaagcggtttattctgacgaaattagaacagcaagcggtaatccgttggtgatcgatgaa
atagtatga
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