Candidatus Sulfidibacterium hydrothermale: LA303_12320
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Entry
LA303_12320 CDS
T07944
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00900
Terpenoid backbone biosynthesis
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
Module
shyr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LA303_12320
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shyr01006
]
LA303_12320
Enzymes [BR:
shyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LA303_12320
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LA303_12320
2.5.1.29 geranylgeranyl diphosphate synthase
LA303_12320
Prenyltransferases [BR:
shyr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LA303_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
EcsC
Motif
Other DBs
NCBI-ProteinID:
UBM62171
LinkDB
All DBs
Position
complement(2994838..2995824)
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AA seq
328 aa
AA seq
DB search
MTNSHQKHSADELKAIFEDYLFTKGYEGFPKVLYEPALQIMKMKAKRIRPVLLLTACEAF
GGDISEALDTACAIETYHNFTLVHDDIIDKADIRRNETTVHKAFGVNKAILTGDAMLLHA
IHLINKAPRDKHFALMTAFEKVAAEVIEGEQYDVDFEDIPEVSLEEYMNMIRLKTSVLLA
AALHMGAILGGASAEDQKNIYNFGEKLGLAFQIKDDYLDTFGDQKTFGKRIGGDILQNKK
TYLLCLSLTKADDEQRRKIFDLFDEKDEEKKIAEMKAVYEALDVHKDTFAIMEKFYEEAL
ASLKALSIGKEQSARLFELAESIYKRSF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaactcacatcaaaaacattcggcagacgaactgaaagccatttttgaagattat
cttttcaccaaaggatatgaaggattcccgaaggtgttgtatgaaccggctttgcagatc
atgaaaatgaaagccaaacggattcgtccggtgctgttgctgaccgcctgcgaagctttt
ggcggcgatatttccgaagccctcgatacggcctgcgccattgaaacgtatcataatttt
acgctggtgcacgatgatattattgacaaagccgatatccgccgtaacgaaaccaccgtt
cacaaggcttttggcgtgaacaaagccatccttaccggcgatgccatgctgctgcatgcc
attcacctgattaacaaagcgccccgcgataaacattttgctttgatgacggcttttgaa
aaagtagctgccgaggtgattgaaggagaacagtatgacgtggattttgaagatattccg
gaagtgtcgctggaggagtatatgaacatgatccggctgaaaacatcggttttgctggcg
gccgcattgcatatgggcgccattctcggtggcgcatcggccgaagaccagaaaaacatc
tataattttggggagaaactcggactggcttttcagataaaagatgattatctcgatacg
tttggcgaccagaaaacttttggaaaacgcatcggcggagatatcctgcaaaacaaaaaa
acgtacctgctttgtctttcgctgaccaaagccgacgacgaacaacgccggaaaattttc
gatctttttgatgaaaaagatgaagagaagaaaattgcggaaatgaaagccgtttatgaa
gccctggatgtgcacaaagatacatttgccatcatggaaaaattttacgaggaagcgctg
gcgtcgctgaaagcattatccattgggaaagaacaaagcgcgcgccttttcgagctggcc
gaatccatttataaaagaagtttctaa
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