Candidatus Sulfidibacterium hydrothermale: LA303_12540
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Entry
LA303_12540 CDS
T07944
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyr03016
]
LA303_12540 (truB)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LA303_12540 (truB)
Transfer RNA biogenesis [BR:
shyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA303_12540 (truB)
Prokaryotic type
LA303_12540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UBM62210
LinkDB
All DBs
Position
complement(3051891..3052607)
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AA seq
238 aa
AA seq
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MAFDFVKGEVLLIDKPWGWTSFDVVNSLRYFIKRVYGLKKIKVGHAGTLDPLASGLLIIC
TGKMTKQIDRFQGMDKVYTGTMQLGMTTPSYDKETEPDHHFDISGLSLEKLRENTTRFTG
EIEQIPPLYSAIKIKGKRAYDFARKKEEVKLRPRKVTIHQFKILNYEPPQAEFYVQCSKG
TYIRSLVHDFGKSLQNGATLLALKRIQIGDYSLSDALSLDDLKKKVLEETGYSFDAEK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgattttgtaaaaggggaggttttactgattgataagccgtggggatggacc
tcctttgatgtggtgaattccttgcgttattttatcaaaagagtatacgggttaaaaaaa
attaaagtgggacatgccggaaccctggatccgctggccagtgggttactgattatttgt
accggaaaaatgaccaagcagattgaccgttttcagggaatggacaaggtttataccgga
accatgcagctgggcatgacaaccccttcgtatgataaagagaccgaaccggatcatcat
tttgatatttccggattaagtctggaaaagctacgtgaaaatacaacccgttttaccggt
gagatagaacagattccgcctctttattcggccattaagatcaaaggaaaaagagcgtat
gattttgcccggaaaaaagaagaggtaaaactccggccgcggaaggtgaccattcatcag
tttaagatcttgaattatgagcctccgcaagccgaattttatgtgcaatgcagtaaagga
acgtatatccggtcgctggtgcacgattttggaaagagccttcagaacggagccaccctg
cttgctttaaagcgtatacaaattggcgattattctctttccgatgctttatcgcttgac
gatttaaagaaaaaagtactcgaagaaaccggttattcttttgatgccgaaaagtaa
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