Shinella sp. HZN7: shn_00395
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Entry
shn_00395 CDS
T04278
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02020
Two-component system
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
shn_00395
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_00395
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
shn_00395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
TrmB
HTH_IclR
GntR
MarR
HTH_36
MarR_2
HVO_A0261_N
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ANH02648
LinkDB
All DBs
Position
complement(81903..82607)
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AA seq
234 aa
AA seq
DB search
MNEINKSAAFWRSFPIFEGFGKETLGEIAGIATYRKWSAGTVIFQRGDEGTYLIVLVTGR
IKLSLITPQGKELSLRQLEAGSVLGEMAILDGQPRSADATAVVATEGYVISKRDFLEILM
RNPTAAQAIIHYLCTKLRETTEQLETIALYDLDARVARFFLATLRNIHGEELPESANLQL
SLSQTEIASIVGASRPKINRSILALQEAGAIRRNDGIIHCHIGRLQNIAEPDDD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatcaacaaaagcgccgccttctggcgctcctttccgattttcgaagggttc
ggcaaggaaacactcggcgagatcgccggcatcgccacctatcgcaaatggtcggccgga
accgtgatcttccagcgcggcgacgaggggacctacctcatcgtcctcgtcaccggccgc
atcaagctctcgctgatcacgccgcagggcaaggaactgtcgctgcgccagctcgaagcg
ggatcggtgctcggcgaaatggcgatcctcgacggccagcctcgttcggcggacgccacc
gccgtcgtcgcgacggaaggttacgtcatctccaagcgggatttcctggagatcctgatg
cgcaacccgacggcggcgcaggcgatcatccactatctctgcacaaagctgcgcgagacg
acggagcagctcgagaccattgcgctctacgacctcgatgcccgcgtcgcgcgcttcttc
ctggcgacgctgcgcaacatccatggcgaggaactgccggaaagcgccaatctgcagctt
tcgctcagccagacggagatcgccagcatcgtcggcgccagccggccgaagatcaaccgc
tcgatcctcgcgctgcaggaggccggcgccatccgccgcaacgacggcatcatccattgc
catatcggccggctgcaaaacatcgccgagccggatgacgactga
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