KEGG   Shinella sp. HZN7: shn_00740
Entry
shn_00740         CDS       T04278                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
shz  Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:shz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shz03400]
    shn_00740
Enzymes [BR:shz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     shn_00740
    5.6.2.6  RNA 3'-5' helicase
     shn_00740
DNA repair and recombination proteins [BR:shz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    shn_00740
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 TPPII_C
Other DBs
NCBI-ProteinID: ANH02705
LinkDB
Position
complement(156056..158581)
AA seq 841 aa
MSIIDSTAGPGLLPAAFAAWFSAKGWQPRAHQMELLARATAGESLLLIAPTGAGKTLAGF
LPALTDLTRRGRIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVEEMGLPITVETRTGD
TPQAKRQRQRLNPPDILLTTPEQVALLIANGEAPRFFKDLKYVIFDELHSLVTSKRGHLL
SLGLARLRRLAPGLRTIGLSATVAEPMDLRRWLVAQRPGAARHAGLVTAPGGARPIITIL
KSKERVPWSGHSAKYAMPEVYEAIRDHKTSLLFVNTRSQAEILFQELWNINEDTLPIALH
HGSLDVGQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGR
ANHRMDEPSRAILVPANRFEVMECQAALDANYLGAQDTPPVGDGALDVLAQHVLGMACAA
PFDEDALFAEITAAAPYTGLPREKFGRIVAFVATGGYALKTYERYARIRRTQDGLWRVSN
PQVAQQYRLNLGTIVEMPMLNVRMVKRGAKGAIGRGGASLGKVEEYFLEMLAPGDTFLFS
GKVLRFEGIRENECLVSQAFSLDPKVPAYAGGKFPLSTYLADQVRSMLDDPHRWGGLPEQ
VRDWLALQRDVSALPKRDELLIETFPRGSRHYMVAYPFEGRLAHQTLGMLLTRRLERAGR
RPLGFVATDYSLAVWALDDLGYSFAVERPSLASLFDEDMLGDDLEAWLDESFMLKRTFRN
CAVIAGLIEQRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRNDAAAGLLDIQRL
GDMLARIKGHITHRRLDRISPLAVPIMLEIGREPVAGEAQDSLLAEAAEDLIAEAMGVAA
I
NT seq 2526 nt   +upstreamnt  +downstreamnt
gtgagcatcatcgattccaccgccggccccggcctcctgcccgccgccttcgccgcctgg
ttttcggccaagggatggcagccgcgtgcgcaccagatggagctccttgcgcgggcgacc
gcgggcgaaagcctgctgctcatcgcaccgaccggcgccggcaagacgctcgccggcttc
ctgccggccctcaccgacctgacgcgccgcggcaggatcccgcccggcagcgccttcacc
ggcatccacacgctctacatctcgccgctgaaggcgctcgccgtcgatatcgagcgcaac
ctgatgaagcccgtcgaggagatgggcctgccgatcaccgtcgagacgcgcaccggcgac
acgccgcaggcaaaacgccagcgccagcgcctcaatccgcccgacatcctgctgacgaca
cccgagcaggtcgccctgctcatcgccaacggcgaggcgccgcgcttcttcaaggacctg
aaatatgtgatcttcgacgagctgcattcgctcgtcacctccaagcgcggccatctcctg
tcgctggggctcgcgcggctgcgccgccttgcgcccggccttcgcaccattggcctgtcg
gccaccgtcgccgagccgatggacctgcggcgctggctggtcgcgcagcgaccgggcgcg
gcgcggcatgccggcctcgtcacggcgccgggcggggcgcggccgatcatcaccatcctc
aagagcaaggagcgcgtgccctggtccgggcattcggcgaaatatgccatgcccgaggtc
tacgaggcgatccgcgaccacaagacctccctgctcttcgtcaacacgcgcagccaggcg
gaaatcctcttccaggagctctggaacatcaacgaggacacgctgccgatcgcgctgcac
cacggctcgctcgatgtcggccagcgccgcaaggtggaggccgccatggcggagaaccgc
ctgcgcgccgtcgtcgccacctcgacgctcgacctcggcatcgactggggcgacgtcgac
ctcgtcatccatgtcggcgcgccgaagggcgcctcgcggcttgcccagcgcatcggccgc
gccaaccaccgcatggacgagccgagccgggcgatcctggtgcccgccaaccgcttcgag
gtgatggagtgccaggcggcgctcgacgccaactatctcggcgcacaggacacgccgccg
gtgggcgacggcgcgctcgacgtgctcgcccagcatgtcctcggcatggcctgcgccgcg
cccttcgacgaggacgcgctctttgccgagatcaccgccgccgcgccctataccggcctg
ccgcgggaaaaattcggccgcatcgtcgcgttcgtcgcgaccggcggctatgcgctgaag
acctacgagcgctatgcccgcatccgcaggacacaggacgggctctggcgcgtctccaat
ccgcaggtcgcgcagcaataccgcctcaacctcggcacgatcgtcgaaatgccgatgctg
aacgtgcgcatggtcaagcgcggtgccaagggcgcgatcggccgcggcggcgcctcgctc
ggcaaggtggaggaatatttcctcgaaatgctggcgcccggcgataccttcctcttctcc
ggcaaggtgctgcgcttcgaaggcatccgcgagaacgaatgtctcgtctcccaggccttc
tcgctcgatccgaaggtgccggcctatgccggcggcaagttcccgctctccacctatctc
gccgaccaggtgcgcagcatgctcgacgatccccaccgctggggcgggctgcccgagcag
gtgcgcgactggctcgccctgcagcgggacgtctccgccctgccgaagcgcgacgaactg
ctcatcgagacctttccgcgcggcagccggcactacatggtcgcctatccgttcgagggg
cggctggcgcaccagacactcggcatgctgctgacgcgccggctggagcgggccggccgc
cggccgctcggcttcgtcgccacggactattcccttgccgtctgggcgctcgacgatctc
ggctacagctttgcggtggagcgcccatcgctcgcaagcctcttcgacgaggacatgctg
ggcgacgacctggaggcctggctcgacgagagtttcatgctgaagcgcaccttccgcaat
tgcgccgtgattgccgggcttatcgagcagcgccatccgggcaaggaaaagaccgggcgg
caggtcaccgtttccgccgacctcatctacgacgtgctgagaagccacgagccggaccac
atcctgctggaggccacgcgcaacgatgcggcggcggggcttttggatattcagcgattg
ggcgatatgctggcacgaatcaagggccacatcacccaccggcggctcgaccgcatatcg
ccgctcgccgtgccgatcatgctggaaatcggcagggagccggtggcgggcgaggcacag
gattccctgctggcggaagcggcggaggacctgatcgccgaggcgatgggcgtggcggcc
atctga

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