Shinella sp. HZN7: shn_01105
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Entry
shn_01105 CDS
T04278
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00280
Valine, leucine and isoleucine degradation
shz00650
Butanoate metabolism
shz00907
Pinene, camphor and geraniol degradation
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
shz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
shn_01105
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
shn_01105
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
shn_01105
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
shn_01105
Enzymes [BR:
shz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
shn_01105
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GFIT
Motif
Pfam:
HMGL-like
ACC_epsilon
GFO_IDH_MocA_C3
Motif
Other DBs
NCBI-ProteinID:
ANH02771
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Position
221936..222796
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AA seq
286 aa
AA seq
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MSRRVEIVEMAARDGLQNEKAIIPAADKIALIDRLSDCGFRRIEATSFVSPKWVPQLADG
AEVMAGIARRPGVSYAALVPNMKGYEAAKAAGVDEVAVFLSASEGFSRANLNCSIAESIE
RARPVAEAAKADGIPLRGYVSCVVQCPYNGPVEPSAVARVTRQLLDLGCHEVSLGDTIGR
ARPEEVAAMLAVVTAVAAPRRLAGHFHDTGGMALDNIRVALDHGLAVFDASVGGLGGCPY
APGARGNVDTLAVADMLAAEGFKTGLDREKLASAAAFARRITGKIA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcgtcgaaatcgtcgagatggccgcccgcgacggcctgcagaacgagaag
gcgatcatccccgccgccgacaagatcgcgctgatcgatcgcctgtcggactgcggcttc
cggcgcatcgaggcgacgagcttcgtcagcccgaaatgggtgccgcagcttgccgacggg
gccgaggtgatggccggcatcgcgcgtcggcccggtgtttcctatgcggcgctggtgccc
aacatgaagggttacgaagcggcgaaggccgccggtgtcgatgaggtcgccgtcttcctc
tccgcttccgaaggcttttcgcgggccaatctcaactgctcgatcgccgagagcatcgag
cgtgcccggccggtcgcggaagcggcgaaggcggacggcattccgctgcgcggctatgtg
agctgcgtcgtgcagtgcccctataacgggccggtggagccctccgccgtggcgcgggtg
acccggcaattgctggacctcggctgccacgaggtgagcctcggcgacacgatcggccgc
gcccgcccggaagaggtggcggccatgctggccgtcgtaactgccgtcgccgcgccgcgg
aggctcgccggccatttccacgatacgggcgggatggcgctcgacaatatccgcgtcgcg
ctcgatcatgggctcgccgtcttcgatgcctcggtcggcgggctcggcggctgcccctat
gcgccgggcgcgcgcggcaatgtggatacgcttgcggtcgccgacatgctggcggcggag
ggttttaagacggggctcgaccgggagaagctggcgtcagccgccgctttcgcgcgtcgg
atcaccggcaagatcgcctga
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