Shinella sp. HZN7: shn_01255
Help
Entry
shn_01255 CDS
T04278
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shz03016
]
shn_01255
Enzymes [BR:
shz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
shn_01255
Transfer RNA biogenesis [BR:
shz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
shn_01255
Prokaryotic type
shn_01255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ANH02795
UniProt:
A0A1A9FV73
LinkDB
All DBs
Position
257270..258205
Genome browser
AA seq
311 aa
AA seq
DB search
MSRPRKPKGRPVSGWLILDKPFDFGSTEAVAKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERTTDDLEGEVTQSSEKRPAADAIQAILGDYTGVI
QQIPPQFSAIKIAGERAYDLAREGETVEIPSREVEIHRLTLIGCPDENTAQFEVECGKGT
YVRALARDFGRQLGCFGHISGLRRTFVAPFGEDDMVPLADLTALEEIEDDAERLAALDAF
LIDTGEALSSLPQIVINDDQAHRLRMGNPIILRGRDAPVSADEAYATARGKLVAIGEIGG
GEFRPKRVFGG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccccgcaaacccaagggccggccggtttccggttggctgatcctcgacaag
ccgttcgatttcggctccaccgaagccgtcgccaagatcaagtggctgttcaaggcgcag
aaggccggccatgccggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgatgcgaccaagaccgttccctatgtgatggatggccgcaagatctacgaattcacc
gtgacctggggcgaggagcgtacgacggacgacctcgaaggcgaggtgacgcagagttcc
gaaaagcggccggccgccgatgcgatccaggcgatcctcggcgattataccggcgtcatc
cagcagatcccgccgcagttctccgccatcaagatcgccggcgaacgcgcctatgacctt
gcccgcgaaggcgaaaccgtcgagattccctcgcgcgaggtggaaatccaccgcctgacg
ctgatcggctgtccggacgagaacacggcgcaattcgaggtcgaatgcggcaagggcacc
tatgtgcgcgcgctcgcccgcgatttcggccgccagctcggctgcttcggccacatctcg
gggctgcgccgcaccttcgtcgcgcccttcggcgaggacgacatggtgccgctcgccgac
ctgacggcgctggaggagatcgaggacgatgccgagcggctggcagcgctcgacgcgttc
ctgatcgataccggcgaggcgctctccagcctgccgcagatcgtcatcaacgacgaccag
gcgcaccgcctgcgcatgggcaatccgatcatcctgcgcggccgcgatgccccggtttca
gccgacgaggcctatgccacggcccgcggcaagcttgtcgcgatcggcgagatcggcggc
ggcgagttccggccgaaacgcgtcttcggcggctga
DBGET
integrated database retrieval system
