Shinella sp. HZN7: shn_01375
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Entry
shn_01375 CDS
T04278
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shz
Shinella sp. HZN7
Pathway
shz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
shn_01375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shz03011
]
shn_01375
Ribosome [BR:
shz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
shn_01375
Bacteria
shn_01375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
DUF5446
Motif
Other DBs
NCBI-ProteinID:
ANH02814
LinkDB
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Position
277153..278859
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AA seq
568 aa
AA seq
DB search
MSQANPTREDFAALLQESFAANDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFG
AKSKDGTLKVGDEVEVYVERIENALGEAVLSREKARREESWAKLEVKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQQVKVQIIRINQETHRISLGMKQLESDPWDGIGTKYPTGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPTKRRISLGLKQTLENPW
QAFAHSHPAGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFNKGDV
VKAVVLDVDVDKERISLGIKQLGRDSVGEAAASGDLRKNAVVSAEVIAINDGGIEVRLVN
HEDITSFIRRGDLSRDRDEQRPERFSVGQTVDARVLNFSKKDRKIQLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRNNAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagcaaaccccacgcgcgaagatttcgcagcccttctgcaggaatccttcgcc
gctaacgatctcgccgaaggctatgtcgccaagggcatcgttaccgcgatcgaaaaggac
gtcgccatcgtcgacgtcggcctcaaggtcgaaggccgcgtcccgctgaaggagttcggc
gcgaagtcgaaggacggcacgctgaaggtcggcgacgaagtcgaagtttacgtcgagcgc
atcgaaaacgcgcttggcgaagctgtcctttcgcgcgaaaaggctcgccgcgaagagagc
tgggccaagctcgaagtcaagttcgaagccggcgagcgcgtcgaaggcgtcatcttcaac
caggtcaagggtggcttcaccgtcgatctcgacggcgccgtcgccttcctgccgcgttcg
caggtcgacatccgtccgatccgcgacgtcaccccgctcatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgccgcggcaacatcgtcgtttcgcgccgtacggttctc
gaagagtcgcgcgccgagcagcggtctgaaatcgtccagaacctcgaagaaggccaggtt
gtcgacggcgtcgtcaagaacatcaccgattacggtgcgttcgtcgacctcggcggcatc
gacggactgctgcacgtcaccgacatggcctggcgccgcgtcaaccatccgtcggagatc
ctgtccatcggccagcaggtcaaggtccagatcatccgcatcaaccaggaaacccaccgc
atctcgctcggcatgaagcagctcgagtccgatccgtgggatggcatcggcaccaagtac
ccgaccggcaagaagatttccggtacggtcacgaacatcaccgactacggtgcgttcgtc
gagctggagccgggcatcgaaggcctgatccacatctccgaaatgtcctggacgaagaag
aacgttcaccccggcaagatcctgtccaccagccaggaagtcgacgtggtcgttctcgaa
gtcgacccgacgaagcgccgcatctcgctcggcctcaagcagacgcttgaaaacccgtgg
caggcttttgcccacagccacccggctggcacggaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgacgtggacggcatggtgcacctgtcc
gacctcgactggaaccgtccgggcgagcaggtcatcgaggagttcaacaagggcgacgtc
gtcaaggctgtcgttctggatgtggacgtcgacaaggagcgcatctcgctcggcatcaag
cagctcggccgtgattcggtcggcgaagctgccgcctcgggtgacctgcgcaagaacgcc
gtcgtttcggccgaagtcatcgcgatcaacgatggcggcatcgaagtgcgtctcgtcaac
cacgaggacatcacgtcgttcatccgccgtggcgatctctcgcgtgaccgtgacgaacag
cgtccggagcgtttctcggtcggccagaccgtcgacgcccgcgtcctgaacttctccaag
aaggatcgcaagatccagctttcgatcaaggcgctcgaaatcgccgaagagaaggaagcc
gtcgcacagttcggttcgtcggactccggcgcatcgctcggcgacatcctcggcgcggct
ctgaagaaccgcaacaacgccgaataa
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