Shinella sp. HZN7: shn_01410
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Entry
shn_01410 CDS
T04278
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shz03016
]
shn_01410
Enzymes [BR:
shz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
shn_01410
Transfer RNA biogenesis [BR:
shz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
shn_01410
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANH06539
UniProt:
A0A1A9G8C1
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All DBs
Position
complement(284845..285471)
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AA seq
208 aa
AA seq
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MASAIRYHEGDISAADAARYTGAIAIDTETLGLIPRRDRLCVVQLSPGDGTADVIRIAAG
QKDAPNLTAMLEDPARQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGL
KDNLKEMLEVDISKQQQSSDWAAETLSPAQLEYAASDVLHLHALRDKLMARLVRDGRLAH
AEACFAFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgcaatccggtatcacgaaggtgacatctcggcggcggatgccgcccgctat
accggcgcgatcgccatcgacaccgaaacgctgggcctcatcccgcgccgcgaccggctg
tgcgtcgtgcagctttcgccgggcgacggcaccgcggacgtcatccgcatcgccgccggc
cagaaggacgcaccgaatctcaccgccatgctggaagacccggcccgccagaagatcttt
cactacggccgcttcgacatcgccgtcctgttccacaccttcggcgtcaccaccacgccg
gtcttctgcaccaagatcgcctcgcgcctgacgcgcacctatacggacaggcacggcctg
aaggacaatctgaaggaaatgctcgaagtcgacatttccaagcagcagcagtcctccgac
tgggcggccgagacgctgtcgcccgcgcagctcgaatatgccgcctccgacgtgctgcat
ctccatgcccttcgcgacaagctgatggcacgcctcgtgcgcgacggccggctggcgcat
gcggaagcctgcttcgccttcctgccgacccgcgccaagctcgacctcctcggctgggaa
gagaccgacatcttcgcccatagctga
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