Shinella sp. HZN7: shn_02735
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Entry
shn_02735 CDS
T04278
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00280
Valine, leucine and isoleucine degradation
shz00650
Butanoate metabolism
shz00907
Pinene, camphor and geraniol degradation
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
shz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
shn_02735
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
shn_02735
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
shn_02735
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
shn_02735
Enzymes [BR:
shz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
shn_02735
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GFIT
Motif
Pfam:
HMGL-like
DUF2065
Motif
Other DBs
NCBI-ProteinID:
ANH03058
UniProt:
A0A1A9FXM1
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Position
complement(563876..564802)
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AA seq
308 aa
AA seq
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MSEALTICECFARDGLQHETTDLSTQTKIALIDTISEAGFPRVEATSYSSPRHVPVFADA
SYVLAGIRRRPGTAYKATCPNLHAVRRAIGDREAGHGPEEISLLVSATQAHTEKNLRTTR
EQQWRNIAEMVALADGRFRLIGVISMALGCPFEGRVDPASVIGDLKAFSDLGVRHVSICD
TTGHGTPGSVRRLFARAMAEVPDVTPIAHFHDTRGTGIANCMAAYEAGCRWFDSAIGGVG
GHPAQIRYGGGYTGNVATEDLVNLFEAEGIATGIDIDRLQAASLQCEQALGRELQSKVAR
TGFGHLAA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggcgctgacaatctgcgagtgctttgcaagggacggcttgcagcacgaaacg
acggacctttccacgcaaaccaagatcgccctgatcgacaccatttccgaagccggcttc
ccgcgcgtggaagcgacgagctacagcagcccccgccatgtgccggttttcgccgatgcc
agctacgtgctggccggcatccgccgccggccgggcacggcctacaaggccacctgcccc
aaccttcatgccgtcagacgggcaatcggggatcgtgaagccggccatggaccggaggag
ataagcctgctggtgtcggcgacacaggcgcacaccgagaagaacctgcgcacgacgcgc
gagcagcaatggcgcaacatcgccgagatggtcgcgctggcggacggccggttccgcctg
atcggcgtgatctccatggcgctcggctgccccttcgaaggccgggtcgacccggcatcc
gtcatcggcgacctgaaggccttctccgacctcggcgtgcgccacgtctccatctgcgac
acgaccggccacggcacgcctggcagcgtgcgccgcctctttgcccgcgccatggccgag
gtgcccgacgtcacgcccatcgcccatttccacgacacgcgcggcaccggcatcgccaat
tgcatggccgcctatgaggccggctgccgctggttcgacagcgccatcggcggcgtcggc
ggccatcccgcccagatccgctatggcggcggctataccggcaatgtggcgacggaagat
ctcgtcaatctcttcgaggccgagggcattgcgaccggcatcgacatcgacaggctccag
gccgcctcactgcaatgcgaacaggcgcttgggcgcgaattgcagagcaaggtggcgcgg
accggtttcggccatctggcagcgtag
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