Shinella sp. HZN7: shn_04115
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Entry
shn_04115 CDS
T04278
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shz
Shinella sp. HZN7
Pathway
shz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
shn_04115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_04115
Enzymes [BR:
shz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
shn_04115
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
shn_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nbl1_Borealin_N
DUF1184
Motif
Other DBs
NCBI-ProteinID:
ANH03304
UniProt:
A0A1A9FX89
LinkDB
All DBs
Position
complement(851471..851722)
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AA seq
83 aa
AA seq
DB search
MTNAAAPDVSALSFEQAVEELEKIVAALERGDVPLDRSIEIYERGEALKKHCETLLSAAE
NRIEKIRLDRAGKPQGTEPLDGT
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgccgccgcccctgacgtctccgccctctccttcgaacaggccgtggaggag
ttggagaagatcgtcgccgcccttgaacgcggcgacgtgccgctcgaccgctccatcgag
atctacgagcgcggcgaggcgctgaagaagcattgcgagacgctgctctcggccgccgag
aaccgcatcgagaagatccgcctcgaccgcgccggcaagccgcagggcacggagccgctc
gacgggacgtaa
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