Shinella sp. HZN7: shn_04250
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Entry
shn_04250 CDS
T04278
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00190
Oxidative phosphorylation
shz00860
Porphyrin metabolism
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
shn_04250
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
shn_04250
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shz01006
]
shn_04250
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
shz03029
]
shn_04250
Enzymes [BR:
shz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
shn_04250
Prenyltransferases [BR:
shz01006
]
Compound prenylation
Protoheme farnesyltransferase
shn_04250
Mitochondrial biogenesis [BR:
shz03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
shn_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
FixQ
Motif
Other DBs
NCBI-ProteinID:
ANH06577
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Position
879435..880379
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AA seq
314 aa
AA seq
DB search
MAVIEHHETVPGGGEVYLSEASPRDFFELLKPRVMSLVVFTAFAGLIVAPGEINPFIAAI
AILCIAVGAGASGALNMWYDADIDAVMTRTAKRPIPSGRIRPEEALAFGLTLSAFSVAIL
GLAVNWLSAGLLAFTIFFYAVIYTMWLKRSTPQNIVIGGAAGAFPPMIGWACVTGGVSIE
SVVLFLITFLWTPAHFWALALFKMRDYDAVGVPMLPNVAGEWTTKVQILVYAVLTAVIAV
VPTVLGFASPGYGLFAAALGLGFVWYSVGVLRMPEGDRAMVPAKKLFAFSIVYLFAVFSG
LMVDHMIASLGWGL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcatcgagcatcacgaaacggttccgggcggcggcgaggtctacctctccgaa
gcgtcgccgcgtgatttcttcgagctcctgaagccgcgcgtcatgtcgctcgtcgtcttc
acggcctttgccggcctcatcgtcgcgccgggcgagatcaacccgttcatcgccgccatc
gcgatcctctgtatcgccgtgggcgccggagcctccggtgccctcaacatgtggtacgac
gcggacatcgatgcggtcatgacccgcaccgccaagcgtcccatcccctccggccgcatc
cgcccggaagaagcgctcgccttcggcctgacgctgtcggccttttcggtcgcgatcctc
ggccttgcggtcaactggctgtcggcgggcctgctcgccttcaccatcttcttctacgcc
gtcatctacacgatgtggctgaagcgctcgacgccgcagaacatcgtcatcggcggcgcg
gccggcgccttcccgccgatgatcggctgggcctgcgtcaccggcggcgtctcgatcgag
agcgtcgtgctcttcctcatcaccttcctgtggaccccggcgcatttctgggcgctcgcc
ctgttcaagatgcgcgactacgacgccgtcggcgtgccgatgctgccgaatgtcgccggc
gagtggaccaccaaggtgcagatcctcgtctacgcggtgctgaccgccgtcatcgccgtg
gtcccgaccgtgctcggtttcgccagccccggctacggtctctttgccgcagcgctcggc
ctcggcttcgtatggtattctgtcggtgtgttgcgcatgccggaaggcgaccgcgcgatg
gtgccggccaagaagctcttcgccttctccatcgtctatctgttcgcggtcttctccggc
ctgatggtcgaccacatgatcgcgtcgctcggatgggggctgtaa
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