Shinella sp. HZN7: shn_04635
Help
Entry
shn_04635 CDS
T04278
Name
(GenBank) LuxR family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_04635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_04635
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
shn_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_10
HTH_30
HTH_38
HTH_23
HTH_11
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ANH03392
UniProt:
A0A1A9FXJ1
LinkDB
All DBs
Position
958939..959649
Genome browser
AA seq
236 aa
AA seq
DB search
MQADATFRVALDIECSQTPSAIEDVVRSFARPLGYDRFVLFSASAARDDVVERIYWVEGD
WFGDGETVDAETYIRRCPVTRHMLETHDPFFWTKAREEGGERYRVVRMPRGRGIHGLQIP
IFGPSGLEGAMSLGGEHIDASPPARLALAVVASAAFLAARRLLEAPADGVTGKLSNRERE
VLAWTAAGRRQSDIAATLDLSERTIENHLRRIRRRLGVATTAQAIKVAIRNGDIEG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagatgccacgttccgtgtcgctcttgatatcgagtgcagccaaaccccttcg
gcgatcgaggatgtggtccgctcctttgccaggccgttgggctacgaccgcttcgtcctg
ttctccgcatcggcggcgcgggacgatgtggtcgaacggatctactgggtcgaaggcgat
tggttcggcgacggtgagacggtcgatgccgaaacctatattcgacgttgtccggtcacg
cggcatatgctggaaacgcatgatccgttcttctggaccaaggcgagggaagaaggcggc
gagcgttatcgtgtcgttcgcatgccgcgcggtcgcggcattcatggcctgcaaatcccg
atcttcggcccgtcgggccttgaaggggcgatgagcctcggcggcgagcacatcgacgca
tccccgccagcgcgcctggcgctggcagtcgtagcttctgccgccttcctcgcggcccgc
cgattgctggaagcccctgccgacggcgtgaccggaaagctctcgaatcgcgagcgcgag
gtcctggcatggacggccgccgggcggcgccagagcgacattgccgccacgctcgacctg
tcggaacgcacgatcgagaatcatctgcgacgaatacgccggcgccttggggttgcgacg
acagcgcaggcgatcaaggtagcgatccgcaacggcgacatcgagggctga
DBGET
integrated database retrieval system
