Shinella sp. HZN7: shn_04730
Help
Entry
shn_04730 CDS
T04278
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_04730
Transporters [BR:
shz02000
]
Other transporters
Pores ion channels [TC:
1
]
shn_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ANH03405
LinkDB
All DBs
Position
complement(984160..986535)
Genome browser
AA seq
791 aa
AA seq
DB search
MRRNGMGRTGYLLAAGLLASAAWGSAGGAFAQAQIQSRAFTFDIAAKPVTQAVNDIGRVT
GLSVVFRENRAIAKTGKPVHGPMTANEALSRLLDGTGLLYRFSNATTVQIYDPVATDGST
VSVEGSTGLAPIVVDGDGNGANSFVATRSMGALKTDAQLIEVPQSVSVIGRKQMEAQNAQ
SVTEVLRYVPGVAIETYGPDPKGYDWIMMRGFNAQATSSYLDGLRQVSSSYSFYRTDPYA
LDTIEVLRGPSSSLYGQSDAGGIVNKTSKRPTEKEVRQVELEYGSHDRKQAAFDLGGALN
EDKSILYRIVGVARDANTQFQYSDGTEIGDDRLMIAPSITWKPDEDTTLTITGQALKDES
GGTIMLFTPTNILLGDPSFNQSTQEQQSIGYEFEHRFDDTWTVRQNVRYGHVDFTLDNIF
LSGLGTAGLDRFARHFDESFDSFTVDNQVQAEFETGALSHQALFGLDYSWSDADVRRYQG
PAPSLNPYAPVYGVTIPTPTTPIVNYAERYNQTGIYAQDRIKFGNGFIATLGGRYDWLNL
DTHNRLTGADTNIDIGNFSGRAGLSYVTAFGLAPYVSFSQSFVPNSGVDENGNTFDPSRG
RQWEVGVKYQPDSFDGLFTVAYFDIVKTNVLNYLSTGYAVATGEIASRGLEVEGKVSIGG
GWDFTGSYTYTNAEITKDALGYVGNRPMLVPEHQASGWLNYTFNDGVLEGASLGAGVRYV
GEVYGNNANSVSVPGRTLFDIGASYRVNEHAKVSLNATNLFDKKYFTTCESSYSCYQGDR
RSVIGKLTVDF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagacggaatggcatggggcgaaccggctatcttctcgcggccggcctgctggcatcg
gcggcatggggttcggcaggaggcgcatttgcgcaagcgcagatccagagccgggcgttc
accttcgacatcgccgccaagccggtaacgcaggccgtcaacgatatcggccgggtcacc
ggcctgtcggtcgtcttccgcgaaaaccgcgcgatcgccaagaccggcaagcccgtgcac
ggcccgatgacggcgaatgaggccctctcccggctgctcgacggcaccggcctcctctat
cgcttcagcaatgcgacgaccgtgcagatctacgatccggtcgcgaccgacggctcgacc
gtcagcgtcgagggttccacgggtctggcccctatcgtggtcgacggcgatggcaacggc
gcgaacagcttcgtcgcaacccgctccatgggagcactgaagaccgacgcccagctcatc
gaagtgccgcaatcggtgtcggtcatcggccgcaagcagatggaagcgcagaatgcgcag
agcgtgacggaagtgctacgctacgttcccggcgtcgcgatcgagacctacgggccggat
cccaaaggctatgactggatcatgatgcgcggcttcaacgcccaggcgacgagctcctat
ctcgacggattgcgtcaggtttccagcagctacagcttctaccgcaccgacccctatgcg
ctcgataccatcgaggtgctgcgcggcccctcctcctcgctctatggccagagtgacgcg
ggcggcatcgtcaacaagacgtcgaagaggccgacggaaaaggaggtgcggcaggtcgag
ctcgaatatggcagccatgaccgcaagcaggccgccttcgatctcggcggtgcgctgaac
gaagacaagagcatcctctatcgcattgtcggcgttgccagagacgccaatacccagttc
cagtattcggatggcaccgaaatcggtgacgaccgcctgatgatcgctccgtcgattacc
tggaagccggacgaggacacgaccctgaccatcacgggccaagcactgaaggatgaaagc
ggcggcacgatcatgctcttcacgccgaccaacattcttctcggcgatcccagcttcaac
cagagcactcaggagcagcagtccatcggttacgaattcgaacatcgcttcgatgacacc
tggacggtccgccagaatgttcgttacggccatgtcgacttcaccctggacaacatcttc
ctgtcggggcttggcacggccggcctcgaccgcttcgcccggcacttcgacgaaagcttc
gattccttcacggtcgacaaccaggttcaggccgaattcgagaccggcgccctttcgcac
caggcgctgttcggtctcgactatagctggtcggacgccgacgtcagacgctatcagggc
ccagccccttcgctgaatccctacgcaccggtctatggcgttaccatcccgacgccgacc
acacccatcgtcaactacgccgagcgctacaaccagaccggcatctacgcccaggaccgg
atcaaattcggcaacggattcatcgcgacgctgggcgggcgctatgactggctcaatctg
gatacgcacaatcgcctgacgggcgcggataccaatattgacatcggcaacttctccggc
cgtgctggtctcagctacgtcaccgcgttcggtctcgctccctatgtcagcttctcgcaa
tccttcgtgccgaacagcggtgtcgacgaaaacggcaacacgttcgatccctcccgcggc
cgccagtgggaggtcggcgtcaaatatcagcccgacagcttcgacggcctctttaccgtg
gcctatttcgacatcgtgaagacgaatgtcctcaactacctgtccaccggctatgcggtc
gcaacgggcgaaatcgcttcacgcggcctggaggtcgaaggcaaggtcagcattggcggc
ggctgggatttcacgggctcctatacctataccaacgcggaaatcacgaaggacgcgctg
ggctatgtcggcaatcgccccatgctcgtgccggaacatcaggcatcgggctggctcaac
tacacgttcaatgacggcgtgctggagggtgcctcgctcggcgcaggcgttcgctacgtc
ggagaggtctatggcaacaatgccaattccgtttccgttccgggccggacgcttttcgat
atcggggccagctatcgcgtcaacgaacacgccaaggtctcgctgaacgcgacgaacctc
ttcgacaagaagtatttcacgacctgcgagtccagctactcctgctaccagggtgatcgg
cgctcggtcatcggcaaactgaccgtcgatttctga
DBGET
integrated database retrieval system
