KEGG   Shinella sp. HZN7: shn_05970
Entry
shn_05970         CDS       T04278                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
shz  Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:shz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    shn_05970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shz03019]
    shn_05970
   03009 Ribosome biogenesis [BR:shz03009]
    shn_05970
   03036 Chromosome and associated proteins [BR:shz03036]
    shn_05970
Enzymes [BR:shz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     shn_05970
Messenger RNA biogenesis [BR:shz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     shn_05970
Ribosome biogenesis [BR:shz03009]
 Eukaryotic type
  90S particles
   RNase
    shn_05970
 Prokaryotic type
  rRNA processing factors
   shn_05970
Chromosome and associated proteins [BR:shz03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     shn_05970
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase
Other DBs
NCBI-ProteinID: ANH03620
LinkDB
Position
1245955..1246674
AA seq 239 aa
MKGAIPLNDVNRKALEELIGYVFTDKDRLDRAITHASARPGKGSNYERLEFLGDRVLGLC
VAEMLFRTFREAKEGELSVRLNQLVSAESCAAVSDDLGLHRFIRTGADVKKLTGKAMLNV
RADVVESLIAAIYLDGGLEAARGFILSNWEGRAARAEGARRDAKTELQEWAHARFGVTPN
YRVDERSGPDHDPRFTVTVEIRGVAPETGIDRSKRAAEQVAATKILEREGVWPKSQATD
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaagggcgccattccgctgaacgacgtcaaccgcaaggctctcgaagagctgatcggc
tacgtcttcaccgacaaggaccgtctcgaccgggcgatcacccatgccagcgcccggccc
ggcaagggcagcaattacgagcggctggaattcctcggcgatcgcgtgctcggcctgtgc
gtcgccgaaatgctgttccgcacctttcgcgaggcgaaggagggcgagctttcggtccgc
ctgaaccagctcgtcagcgcggaaagctgtgcggcggtctccgatgacctcggcctgcac
cgcttcatccgcaccggcgcggacgtgaagaagctcaccggaaaagccatgctgaatgtg
cgggccgatgtggtagagtcgctgatcgccgcgatctatctcgacggcgggttggaggcg
gcgcggggtttcatcctctccaactgggagggcagggccgcccgcgcggaaggcgcgcgg
cgcgatgccaagaccgaattgcaggaatgggcgcatgccaggttcggcgtgacgccgaac
taccgggtggacgagcgctcggggccggaccacgatccccgcttcaccgtgacggtggag
atccggggcgtcgcgccggaaaccggcatcgaccgctcgaaacgggccgccgaacaggtg
gccgcgacaaagattttggaacgcgaaggcgtctggccgaaaagccaagccacggattga

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