KEGG   Shinella sp. HZN7: shn_06160
Entry
shn_06160         CDS       T04278                                 
Name
(GenBank) transcriptional regulator
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
shz  Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:shz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shz03016]
    shn_06160
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shz02048]
    shn_06160
Transfer RNA biogenesis [BR:shz03016]
 Prokaryotic type
  tRNA degradation factors
   shn_06160
Prokaryotic defense system [BR:shz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    shn_06160
SSDB
Motif
Pfam: PIN SAM_5
Other DBs
NCBI-ProteinID: ANH03656
UniProt: A0A1A9FXS3
LinkDB
Position
1281587..1282003
AA seq 138 aa
MTAFRYMLDTNAISEMVRNPDGTLADRVKAAPTDALCTSAIVVSELRYGLRKRGAVSLAR
RVEAVLGEIAILPYDTPVSFAYAQTRDALERRGQPIGYTDLFIAAHALSLELTLVTANIR
EFSRVEGLKVENWLEAGP
NT seq 417 nt   +upstreamnt  +downstreamnt
gtgacggcctttcgctacatgctggatacgaatgccatctcggagatggtccgcaatcct
gatgggacgctcgctgatcgggtgaaggccgcgccgacggacgcattgtgcacgagcgcc
atcgtggtttcggagctgcgttacggtctgcggaaaaggggagcggtttcgctcgcccgt
cgtgtcgaggccgtcctgggggagattgcgatcctcccctatgatacgcccgtttccttc
gcttatgcgcaaacgcgcgatgcactggagagaaggggccagccgatcggctataccgac
cttttcatcgccgcccatgctctctcgctggaactcacgctcgtcaccgccaatatccgt
gaattctcgcgtgtcgagggcctgaaggtcgagaactggctggaggcaggtccatga

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