Shinella sp. HZN7: shn_06405
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Entry
shn_06405 CDS
T04278
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11690
TRAP-type transport system large permease protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
shn_06405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_06405
Transporters [BR:
shz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
shn_06405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ANH03704
UniProt:
A0A1A9FYF5
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Position
1333765..1335540
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AA seq
591 aa
AA seq
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MIEFIAENLAPIMFVSLIVFLLLGYPVAFALAANGLLFFIVGVELAPLSDSINLSWPLLN
AMPERLWGVMSNDTLLAIPFFTFMGIVLERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVG
ALLAATTGVVAASVIAMGLISLPIMLRYGYDRSIASGVIAASGTLAQIIPPSLVLIVLAD
QLGRSVGDMYAGALIPGLVLTGLYMLYILLMTFLKRDSMPALPLEARSLGAGITSLFIAL
VVAAGIAYAAHVYLYPTHGENADILGATVGVAFIYAVAVADKAFGINMMSRLAQQVIIVL
IPPLALIFLVLGTIFLGIATPTEGGAMGAVGALVMAAAKGRLSMEVVRSALTSTTRLSAF
VMFILIGARVFSLTFYGVNGHLWVEHLLVSLPGGETGFLIAVNVLVFFLAFFLDFFELAF
IIVPLLAPAADKLGIDLIWFGVLLGINMQTSFMHPPFGFALFYLRSVAAKVPYLDKVTGK
VTQPVTTGQIYWGAVPFVGIQILMVGLTILFPSMVMHYKGEGTGIDPATIKIEVPGFGSG
LTLPDNGGGLGLPGGLQLPAGNPLEGGGEKPAEQGGEQKPATDLSSPPSFN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcatcgcggaaaaccttgcgccgatcatgttcgtgtcgctgatcgtgttc
ctgctgctgggctatccggtggcattcgcgctcgcggcgaacggcctgctcttcttcatc
gtcggcgtggagctcgccccgctctccgattcgatcaacctgtcctggccgctgctgaac
gcgatgccggaacggctgtggggggtgatgtcgaacgacacattgctcgccatccccttc
ttcaccttcatggggatcgtgctcgaacgatccggtatggccgaggaccttctcgacacg
atcggccagcttttcgggccgatccgcggcggccttgcctatgcggtcatcttcgtcggc
gcgctgcttgccgccaccaccggcgtcgtcgccgcgtcggtcatcgccatgggcctcatc
tcgctgccgatcatgctgcgctacggctatgaccggtcgatcgcctcgggcgtcatcgcg
gcctccggcacgctcgcgcagatcatcccgccctcgctcgtcctcatcgtgcttgccgac
cagctcggccgctcggtcggcgacatgtatgccggcgcgctgatccccggcctggtgctg
accgggctctacatgctctacatcctgctcatgaccttcctgaagcgggactccatgccg
gcgctgccgctggaggcgcgttcgctcggggccggcatcacctcgctcttcattgcgctc
gtcgtcgcggccggcattgcctatgcggcgcatgtctacctctatccgacccatggcgag
aatgccgacatcctcggcgcgaccgtcggcgtcgccttcatctatgccgttgcggtggcg
gacaaggcgttcggcatcaacatgatgtcgcggcttgcccagcaggtcatcatcgtgctg
atcccgccgctggcgctgatcttcctcgtgctcggcacgatcttcctcggcatcgccacg
ccgacggaaggcggcgccatgggcgcggtcggcgcgctcgtcatggcggcggccaagggc
cggctcagcatggaggtggtccgttcggcgctcacctccaccacccgcctttcagccttc
gtgatgttcatcctcatcggcgcccgcgtcttctcgctcaccttctacggcgtgaacggg
catctgtgggtggagcatctgctggtctcgctgccgggcggcgagacgggcttcctgatc
gcggtgaacgtgctggtcttcttcctggcgttcttcctcgatttcttcgagctcgccttc
atcatcgtgccgctgctcgcgccggccgccgacaagctcggcatcgacctcatctggttc
ggcgtgctgctcggcatcaacatgcagacgagcttcatgcacccgcccttcggctttgca
ttgttctacctgcgttcggtcgccgccaaggtgccctatctcgacaaggtgacgggcaag
gtgacgcagccggtgacgacggggcagatctactggggcgccgtgcccttcgtcggcatc
cagatcctcatggtcggcctgaccatcctcttcccgagcatggtcatgcactacaagggc
gagggcaccggcatcgatcccgcgacgatcaagatcgaggtgcccggcttcggcagcggc
ctgacgctgcccgacaatggcggcggcctcggccttccgggtggcctgcagcttcccgcc
ggcaacccgctggaaggcggtggtgaaaagccggccgagcagggcggcgaacagaagccc
gccacggacctttccagtccgccgtccttcaactga
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