Shinella sp. HZN7: shn_06425
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Entry
shn_06425 CDS
T04278
Name
(GenBank) glycosyl transferase family 1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shz03012
]
shn_06425
Translation factors [BR:
shz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
shn_06425
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_30
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_22
AAA
SbcC_Walker_B
AAA_23
nSTAND6
Lumazine_bd_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANH03708
LinkDB
All DBs
Position
complement(1338780..1340666)
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AA seq
628 aa
AA seq
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MITISGLTARVAGRLLIDNASLSLPSGVKVGLVGRNGTGKSTLFRVITGQLAAEAGSISL
PKNARIGQVAQEAPSTDDPLIEIVLAADKERASLLKEAETATDPHRIAEIQTRLGDIGAH
SAEARAASILAGLGFDHEAQQRPAKSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLE
GTLWLEDYVRRYPHTVIIISHDRDLLNTAVNAIVHLDQQKLTFYRGSYDQFERQKAEADE
LQMKAKAKNEAARKHLQSFIDRFKAKATKAKQAQSRVKALERMGTVAAVVETHVQPITFP
EPEKQPASPIVAIEGGAVGYEPGKPILKQINLRIDNDDRIALLGSNGNGKSTFAKFISGR
LEAESGAVKRAPGLKIGFFAQHQLDDLIPEQSPVEHVRRLMPEAPEAKVRARVAQMGLAT
EKMSTAAKDLSGGEKARLLMGLAAFDAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI
LISHDRHLIEATVDRLWLVNNGTVKTFDGDMEEYRSLIVQSGKKDDKEKSASNGGETSKA
DLRKANADRRAQLAPLKKKINEIESLTAKLQKQIQLFDTELADPALYEKSPAKAAEKAKL
RALAVDKLSDAEEQWLELSAEYEEAMAG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgatttccggcctcactgcccgcgtcgccgggcgtctcctcatcgataacgcc
tccctttcgctgccgagcggggtgaaggtgggtcttgtcggccgcaacggcaccggcaag
tccacgctgttccgcgtcatcaccggccagctcgccgccgaagccggcagcatctcgctg
cccaagaacgcgcgcatcggccaggtggcgcaggaggccccgagcacggacgatccgctg
atcgagatcgtgctggccgccgacaaggagcgcgcgagcctcctgaaggaagcggagacg
gcgaccgacccgcatcgcatcgccgaaatccagacccgcctcggcgatatcggcgcccat
tcggcggaagcccgcgcggcgagcatccttgccggcctcggcttcgaccacgaggcgcag
cagcgcccggcaaagagcttttccggcggctggcgcatgcgcgtggcgctggcggccgtg
ctgttttccgagccggacctcctgctgctcgacgagccgaccaactatctcgacctcgaa
ggcacgctgtggctggaggattacgtgcggcgctacccgcacacggtcatcatcatcagc
cacgaccgggacctgctcaacaccgccgtcaacgccatcgtgcatctcgaccagcagaag
ctgaccttctatcgcggctcctacgaccagttcgagcgccagaaggccgaggccgacgaa
ttgcagatgaaggcgaaagccaagaacgaggccgcgcgaaaacacctgcaaagcttcatc
gaccgcttcaaggccaaggccaccaaggccaagcaggcgcagagccgcgtcaaggcgctg
gagcgcatgggcacggtcgccgccgtcgtcgagacgcatgtgcagccgatcacctttccg
gagccggagaaacagccggcctcgccgatcgtcgcgatcgagggcggcgcggtcggttac
gagccgggcaagccgatcctgaaacagatcaaccttcgcatcgacaatgacgaccgcatc
gccctgctcggctcgaacggcaacggcaagtcgaccttcgccaagttcatctccggccgg
ctggaggccgaatcgggcgcggtgaagcgcgcgccgggcctgaagatcggcttcttcgcc
caacaccagctcgacgacctcattcccgagcaatcgccggtcgagcatgtgcgccggctg
atgccggaggcgccggaagcgaaggtccgcgcccgcgtggcgcagatggggcttgcgacg
gagaagatgtcgacagccgccaaggacctctccggcggcgagaaggcgcgcctcctgatg
ggccttgctgccttcgacgcgccgaacctgctcatcctcgacgagccgaccaaccatctc
gacatcgacagccgccgcgcgctgatcgaggcgctgaacgactacgagggcgccgtcatc
ctcatctcgcacgaccggcacctcatcgaggcgaccgtcgaccggctctggctggtcaac
aacggcacggtgaagaccttcgacggcgacatggaggaatatcgcagcctcatcgtccag
tccggcaagaaggacgacaaggagaaatccgcctccaacggcggcgagaccagcaaggcg
gacctgcgcaaggcgaatgccgaccgacgcgcccagctcgctccgctgaagaaaaagatc
aatgaaatcgaatccctgacggcgaagctgcagaagcagattcagctttttgacacggag
cttgcagatcccgcgctctacgagaagagcccggccaaggcggcggagaaggccaagctg
cgcgccctggcggtcgacaaattgagcgatgccgaggaacagtggctggagctttcggcg
gagtacgaggaggcgatggccgggtaa
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