Shinella sp. HZN7: shn_06900
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Entry
shn_06900 CDS
T04278
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
shz03060
Protein export
shz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
shn_06900
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
shn_06900
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_06900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shz02044
]
shn_06900
Secretion system [BR:
shz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
shn_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
MRP-S24
Motif
Other DBs
NCBI-ProteinID:
ANH03796
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Position
1431409..1433946
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AA seq
845 aa
AA seq
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MKTSKWALLVYIAIILFGVLAAVPNVLTPEQQAKFGRYLPANPVTLGLDLKGGSHLVLEV
DSAALRKARMDVLLNDSRAILRTAGERASAARLAGTTLTITLPDQATLDKVLPEVRKLAT
PTTTLGFSAGSADIDVATSGNLINVTLTEAGINERMSAAVEQSLEIIRRRVDQVGVAEPL
IQRVGGDRILVQLPGLQDPTRLRQLLGSTAQMSFHMVDQTVDPNGVAPRGVMILPGANDA
GKYAVEERVAISGDRLADAKAGFDQRTNEPIVSFSFDSTGARQFAEITQANVGKPFAIVL
DGKVLTAPVIREPIIGGQGQISGNFNPQEATVLSALLRSGALPAPLTIIEERTVGPNLGS
DSIRMGLYTGLAGLAAVVVLMQVLYGSWGLIANLGLVLHTVLTIGTLGLLGSTLTLPGIA
GIILGIGMAVDANILINARIREETAAGAGAMKALDVGFNKAYATIVDGNMTTMVGMILLF
MFGSGPVRGFAITMIIGLAISMFTSITFVRLLMREVVIRRKMKRIDIHSIFGKVWSIPSF
SFMRGRYIAIAMSAFISISSVILFFTPGLNYGIDFVGGIQVEATSKTPIDLAPLREKMEG
LNLGEVALQEFGQGTSVLVRVQRQPGGEEAQTAALQQVRDGVAEVIPDANFERTEVVGPT
VSTELARSGFLAVGLGMLAILIYIWWRFEWHFAVGAIATLILDITKMVGFFALMQIDFNL
TAIAAVLTLIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDLSINQVVMRCIFTSVAVAA
SLLPMAIWGGDTVKPFAWPMLFGVVVATTSSIYIGGPILLFLSRWWKDRDTARAAGAATT
PATEA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctccaaatgggcattgttggtctatatcgcgatcatcctcttcggggtgctc
gcggccgtgcccaacgtgctgacgcctgagcagcaggcgaaattcgggcgctacctgccc
gccaatcccgtcaccctcggcctcgacctgaagggcggttcgcatctcgtgctggaggtc
gattccgcagcgctgcgcaaggcgcgcatggacgtgctgctgaacgattcccgcgccatc
ctgcgcacggccggcgagcgcgcctccgccgcccgcctcgccggcacgacgctgacgatc
acgctgcccgaccaggccacgctcgacaaggtgctgccggaagtgcgcaagctggcgacg
ccgacgacgacgctcggcttttccgccggcagcgccgatatcgatgtcgccaccagcggc
aacctgatcaacgtcacgctgacggaagccggcatcaacgagcgcatgtccgccgccgtc
gagcagagccttgagatcatccgccgccgcgtcgaccaggtcggcgttgccgaaccgctg
atccagcgcgtcggcggggaccgcatcctcgtgcagctccccggcctgcaggacccgacg
cgcctgcgccagttgctcggctcgaccgcgcagatgagcttccacatggtcgaccagacc
gtggacccgaacggcgtcgccccgcgtggcgtgatgatcctgcccggcgccaacgacgcc
ggcaaatatgccgtggaagagcgcgtcgccatctcgggcgatcgccttgcggatgccaag
gccggcttcgaccagcgcacgaacgagccgatcgtctcgttcagcttcgattcgacgggc
gcgcgccagttcgcagaaatcacccaggcgaatgtcggcaaacccttcgccatcgtgctc
gacggcaaggtgctgacggcgccggtcatccgcgagccgatcatcggcggccagggccag
atttccggcaacttcaacccgcaggaggcgaccgttctctcggcgctgctgcgctccggc
gcgctgccggcgccgctcaccatcatcgaggagcgcaccgtcggcccgaacctcggctcc
gactcgatccgcatgggcctctataccggccttgccggtcttgccgccgtcgtcgtgctg
atgcaggtgctctacggttcctggggcctcatcgccaatctcggcctcgtgctgcacacg
gtactgaccatcggcacgctcggcctgctcggctcgacgctcaccttgcccggcatcgcc
ggcatcatcctcggcatcggcatggccgttgacgccaacatcctgatcaacgcccgtatc
cgagaggagacggcggccggggcgggggccatgaaggcgctcgacgtcggcttcaacaag
gcctatgcgaccatcgtcgacggcaacatgacgaccatggtcggcatgatcctgctcttc
atgttcggctccggcccggtgcgcggcttcgccatcaccatgatcatcggcctggcgatc
tcgatgttcacctcgatcaccttcgtgcgcctcttgatgcgcgaggtggtgatccgccgc
aagatgaagcggatcgacatccactcgatcttcggcaaggtctggagcattccgagcttc
tccttcatgcgtggccgctacatcgccatcgccatgtcggccttcatctcgatcagctcg
gtcatcctgttcttcacgccgggcctcaactacggcatcgacttcgtgggcggcatccag
gtcgaagcgacgtccaagacgccgatcgacctcgccccgctgcgcgagaagatggaaggc
ctcaatctcggtgaagtggccctgcaggaattcggccagggcacgtccgtcctcgtgcgc
gtccagcgccagccgggcggcgaggaggcgcagaccgcagccctccagcaggtccgagac
ggcgttgccgaagtgatcccggacgccaatttcgagcgcaccgaagtggtcggcccgacc
gtcagcaccgagcttgcccggtccggcttcctggccgtcggcctcggcatgctggcgatc
ctgatctacatctggtggcgcttcgaatggcacttcgccgtgggcgccatcgcgacgctg
atcctcgacatcaccaagatggtcggtttcttcgcgctgatgcagatcgacttcaacctg
acggccatcgccgccgtgctgacgctgatcggctattcggtcaacgacaaggtggtggtg
tacgaccgcatgcgcgagaacctgcgcaagtacaagtcgatgcccttctcggacctcatt
gacctgtcgatcaaccaggttgtcatgcgatgcatcttcacctccgtcgccgtcgcggcc
tcgctgctgccgatggcgatctggggcggcgacacggtgaaacccttcgcctggccgatg
ctgttcggtgtggtcgtcgccacgacctcgtcgatctatatcggcggtccgatcctgctc
ttcctcagccgctggtggaaggatcgcgacacagcgcgcgccgccggcgcggcgacgaca
ccggcaacggaagcatga
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