KEGG   Shinella sp. HZN7: shn_07680
Entry
shn_07680         CDS       T04278                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
shz  Shinella sp. HZN7
Pathway
shz00230  Purine metabolism
shz00240  Pyrimidine metabolism
shz01100  Metabolic pathways
shz01232  Nucleotide metabolism
Module
shz_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
shz_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:shz00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    shn_07680
   00240 Pyrimidine metabolism
    shn_07680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shz03400]
    shn_07680
Enzymes [BR:shz01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     shn_07680
DNA repair and recombination proteins [BR:shz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    shn_07680
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN CPL
Other DBs
NCBI-ProteinID: ANH03938
UniProt: A0A1A9G071
LinkDB
Position
complement(1583771..1587589)
AA seq 1272 aa
MRIERRFTKPGQSAYAEIEFRKAVSEIKNPDGSIVFRLADIDVPAQFSQVAADILAQKYF
RKAGVPARLKKVEENDVPSFLWRSVPDTEALKALPEGERYGSETDARQVFDRLAGTWTYW
GWKGKYFASEEDAAAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNENGIMDLWVREARLFKYGSGTGSNFSHLRG
EGERLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEDYINWKVKE
EQKVAALVTGSKIVAKHLKAIMKACVNCSADNDACFDPAENPALKREIRAAKKDQVPENY
IKRVIQFAKQGYKDIEFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGDWHLT
ARKDGKVMKTLKARDLWESISYAAWASADPGLHFNTTMNDWHTCPAAGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDAATKKINIADYEHAVRLWTIVLEISVMMAQFPSRQIAELSY
EYRTLGLGYANIGGLLMSSGIPYDSAEGRAIAGSLTAIMTGVAYATSAEMASELGPFPNF
APNRDNMLRVMRNHRRAAYGETAGYEALSVNPVALVHADCSDEALVAHAVAAWDKAVELG
EKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSESQIAEIEAYAVGHGNFNQAPAVNPGSLKAKGFPEDKIEAVNAGLKSAFDIKFAF
NQWTLGADFLKDVLKVSDEQLADMSFNLLEHIGFSKKEIEAANIHVCGAMTLEGAPFLKA
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLALKANALYRDGSKLSQPLNASLIEDAEDEDDAVETLVASPAAAQAVAVTEKIVEK
IIERVVREREKLPNRRQGYTQKAVIGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMM
NNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGIVVGNDAIKNATSILDYVFRELAVSYL
GRHDLAHVDTSDFSNTALGKGIQEGKTNLISTGWTRGHKPTLIQGGQGGDRPLAEPKGAA
TAAPAKASSVSNITSFAGSAARKIEPVTAISSSEIVAFKRDYEERAAELAEEIADETAEE
ATESITALFSDKAAAQAASAKADAKKLENERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGSTSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgcatagaacgtcgtttcaccaaacccggccagtcggcctatgcggaaatcgaattc
cgcaaggccgtgagcgagatcaagaacccggacggctccatcgtcttccgccttgcggat
atcgacgtgccggcccagttctcccaggtcgccgccgacatcctcgcgcagaaatatttc
cgcaaggccggcgtgccggcacgcctgaagaaggtcgaggagaacgacgtcccctccttc
ctgtggcgctccgtgccggacaccgaagccctgaaggcgctccccgagggtgagcgctac
ggctcggaaaccgacgcccgccaggtcttcgaccgcctcgccggcacctggacctactgg
ggctggaagggcaagtatttcgcttccgaggaagacgctgccgccttcaaggacgaactc
gcctatatgctcgccacgcagcgcgtcgccccgaactcgccgcagtggttcaacacgggc
ctgcactgggcctacggcatcgacggccccggccagggccatttctatgtcgaccccttc
accggcaagcttaccaagtccaagtccgcctacgagcatccccagccgcacgcctgcttc
atccagtccgtcgaggacgacctcgtcaacgagaacggcatcatggacctgtgggtgcgt
gaagcccgcctcttcaaatacggctccggcaccggctccaacttctcgcacctgcgcggc
gaaggcgaaaggctttcgggcggcggccgttcctccggcctgatgagcttcctgaagatc
ggcgaccgcgcggccggtgccatcaagtcgggcggcacgacgcgccgcgcggccaagatg
gtcgtggtcgacatcgaccatcccgatatcgaggactacatcaactggaaggtcaaggaa
gagcagaaggtggcggccctcgtcaccggctcgaagatcgttgccaagcacctcaaggcc
atcatgaaggcctgcgtgaattgctcggccgacaacgacgcctgcttcgatcccgccgag
aacccggccctcaagcgcgagatccgtgccgccaagaaggaccaggttccggaaaactac
atcaagcgcgtcatccagttcgccaagcagggctacaaggacatcgagttcaagacctac
gacacggactgggattcggaagcctatctcaccgtctccggccagaactcgaacaattcc
gtctcgctgaaggacgacttcctgcgcgccgtcgaaaatgacggcgactggcacctcacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcgcgggacctgtgggaatcgatc
tcctacgccgcctgggcttcggccgatccgggcctgcacttcaacacgacgatgaacgac
tggcacacctgcccggccgccggcccgatccgcgcgtcgaacccgtgctcggaatatatg
ttcctcgacgacacggcctgcaacctcgcctcgctgaacctcctgcagttcaaggatgcg
gcgacgaagaagatcaacatcgccgactacgaacacgccgtccgtctctggaccatcgtg
ctcgaaatctcggtgatgatggcccagttcccgtcgcgccagatcgccgagctctcctac
gaataccgcacgctcggcctcggctatgccaatatcggcggcctgctgatgtcctcgggc
attccgtatgactcggccgaaggccgcgccatcgcaggtagcctgaccgccatcatgacc
ggtgtcgcctatgcgacctcggccgagatggccagcgaactcggccccttcccgaatttc
gcgccgaaccgcgacaacatgctgcgcgtcatgcgcaaccaccgccgcgccgcctatggc
gagaccgccggctacgaggccctttcggtgaacccggtcgccctcgtccatgccgattgc
tcggatgaggcgcttgtcgcccatgccgtcgccgcctgggacaaggccgtcgaactcggc
gagaagcacggctaccgcaatgcccagacgaccgtgatcgcgccgaccggcacgatcggc
ctcgtcatggactgcgacaccaccggcatcgagcccgacttcgcgctggtgaagttcaag
aagctcgccggcggcggctacttcaagatcatcaaccgcgccgttccggaagccctgcgc
acgctcggctattcggaaagccagatcgccgagatcgaggcctatgccgtcggccatggc
aatttcaaccaggcacccgccgtcaaccccggctcgctgaaggccaagggttttccggaa
gacaagatcgaggccgtcaatgccggcctgaagtccgccttcgacatcaagttcgccttc
aaccagtggacgctcggcgccgacttcctgaaggacgtgctgaaggtctcggacgaacag
ctcgccgacatgtccttcaacctgctggagcatatcggtttctccaagaaggagatcgag
gctgccaatatccatgtctgcggcgcgatgacgctggaaggcgcccccttcctcaaggcg
gaacacctgccggtcttcgattgcgccaatccctgcggcaagatcggcaagcgctacctt
tcggtcgaaagccacatccgcatgatggcggccgcccagccgttcatctcgggcgccatc
tccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctacatg
ctctcctggaagctcgcgctgaaggcgaacgccctctaccgcgacggctcgaagctgtcc
cagccgctcaacgcctcgctgatcgaggacgcggaggacgaggacgacgccgtcgagacg
ctggtcgcaagcccggccgccgcccaggccgtggcggtcacggaaaagatcgtcgagaag
atcatcgagcgcgtggtgcgcgagcgtgagaagctgccgaaccgccgccagggctacacc
cagaaggccgtcatcggcgggcacaaggtgtatctgcgcaccggcgaattcggcgacggc
cgcctcggcgagatcttcatcgacatgcacaaggaaggcgccgccttccgcgcgatgatg
aacaacttcgccatcgccatctcgctcggcttgcagtacggcgtgccgctggaggaatat
gtggaggccttcaccttcaccaagttcgagccggccggcatcgtcgtgggcaacgacgcg
atcaagaacgcgacgtcgatcctcgactatgtcttccgcgagcttgccgtctcctatctc
ggccgccacgaccttgcccatgtcgatacgtccgacttctccaacacggcgctcggcaag
ggcatccaggaaggcaagacgaacctgatctcgaccggctggacgcgcggccacaagccg
acgctcatccagggcggccagggcggcgatcgcccgctggcagaacccaagggcgccgcc
accgccgccccggccaaggcctcgtccgtcagcaacatcacctcgttcgccggcagcgcg
gcccgcaagatcgagccggtgacggcgatctcctcctccgagatcgttgccttcaagcgc
gactacgaggagcgcgcggccgaacttgccgaggagatcgcggacgaaacggccgaggaa
gcaaccgagagcatcaccgccctcttctccgacaaggccgccgcccaagccgccagcgcc
aaggccgacgccaagaagctggagaacgagcgccgcatgcgctccatcgcccagggctac
accggcaacatgtgctccgagtgccagaacttcacgatggtgcgcaacggcacctgcgag
aagtgcgacacctgcggctcgacgagcggctgcagctga

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