Shinella sp. HZN7: shn_08545
Help
Entry
shn_08545 CDS
T04278
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00240
Pyrimidine metabolism
shz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
shn_08545
Enzymes [BR:
shz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
shn_08545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
ANH04079
UniProt:
A0A1A9G1B9
LinkDB
All DBs
Position
complement(1759224..1760150)
Genome browser
AA seq
308 aa
AA seq
DB search
MTRPVSALLPMQYSDEVAAAKARGAPIVALESTIITHGMPYPGNLNMARSVERIIREEGA
VPATIAVIDGILHIGLDDALLEALAQTEGAMKLSRADLAFAIAERRTGATTVAATMIGAA
RAGIKVFATGGIGGVHRKAEETFDISADLDELSRTGVIVVCAGAKAILDIPKTLEVLETR
GVPVVTYDSPVFPAFWSRDSGLKSPLTLNSPAAIANFQKVRDQLGVDGGMLIANPVPEAD
EIEREEMEIYIARALDNAERDEIAGKAVTPYLLDSLFRLTDGRSLKTNIALVENNARLAA
EIAVALAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacccgtttccgccctcctgccgatgcagtattcggacgaagtcgccgccgcc
aaggcccgcggcgcgccgatcgtcgcgctcgaatcgacgatcatcacccacggcatgccc
tatccgggcaacctgaacatggcccgcagcgtcgagcgcatcatccgcgaggaaggcgcc
gtgccggcgaccatcgccgtcatcgacggcatcctgcatatcggcctcgacgatgcgctg
ctggaagctttggcgcagaccgagggtgcgatgaagctctcgcgcgccgaccttgccttc
gcgatcgccgagcgccgcaccggcgcgacgaccgtggcggcgacgatgatcggcgcggca
cgcgccggcatcaaggtcttcgcgaccggcggcatcggcggcgtgcaccgcaaggcggag
gagaccttcgacatctccgccgacctcgatgaactgtcgcgcaccggcgtgatcgtcgtc
tgcgcgggcgccaaggcgatcctcgacatccccaagaccctggaagtgctggagacgcgc
ggcgtgcccgtcgtcacctatgacagcccggtcttcccggccttctggtcgcgcgattcg
ggcctgaagagcccgctgacgctgaacagcccggcggccatcgccaatttccagaaggtg
cgcgaccagctcggcgtcgacggcggcatgctgatcgccaatccggtgccggaggccgac
gagatcgaacgcgaggagatggagatctacatcgcccgcgcgctcgacaatgccgaacgc
gacgagatcgccggcaaggccgtgacgccctacctgctcgacagcctgttccgcctgacg
gacggccgcagcctcaagaccaacatcgcgctcgtcgagaacaatgcacggctggcggcg
gaaatcgccgtggccctggcggactga
DBGET
integrated database retrieval system
