Shinella sp. HZN7: shn_08790 Help Entry shn_08790         CDS       T04278                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism shz  Shinella sp. HZN7 Pathway shz03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:shz00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     shn_08790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:shz03400]     shn_08790 DNA repair and recombination proteins [BR:shz03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      shn_08790   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       shn_08790 SSDB OrthologParalogGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N BCA_ABC_TP_C DnaJ_CXXCXGXG AAA_29 AAA_25 nSTAND1 RsgA_GTPase AAA_33 AAA_21 Motif Other DBs NCBI-ProteinID:  ANH04123 LinkDB All DBs Position complement(1816709..1819627) Genome browser AA seq 972 aa AA seqDB search MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGV PYSPATGLPIESQTVSQMVDRVIDFGEGTRLYILAPVVRGRKGEYRKELAELMKKGFQRV KVDGQFYEIADVPALDKKYKHDIDVVVDRVVVRPDLSSRLADSLETCLKLADGLAIAEFA DKPLPVEETSAGGSANKSLNDTHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT CDGLGSQQKIDPDLIVPEAERTLRDGAIAPWAKSSSPYYNQTLEALGAAYGFKLSSRWSE LSEAAQDAILNGTKEKIEFNYKDGARSYKTVKTFEGIVPNLERRWKETDSAWSREEIERY MSAAPCPACNGFRLKPEALAVKINRLHIGEATAMSIRVARDWFEALPEHLNAKQNEIAVR ILKEIRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG LHQRDNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEVIAQGTPG EVIANPASLTGKYLSGELAVAVPAERRKPKKKKEIKVVGAKANNLKNVTASIPLGVFTAV TGVSGGGKSTFLIETLYKSAARRIMGAREIPAEHERIDGFEYIDKVIDIDQSPIGRTPRS NPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLTTLNQVGLG YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELV NQGNSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAEGTPEDVVKVERSYTGHFLREL LERRPMKKVAAE NT seq 2919 nt NT seq  +upstreamnt  +downstreamnt atgagcgaactcaagaccatttccattcgcggcgcgcgcgaacacaatctcaagggcatc gacctcgacctgccccgcaacaagctgatcgtcatgaccgggctttcgggctccggcaag tcgtcgctcgccttcgacacgatctatgccgagggccagcggcgttatgtcgagagcctt tcggcctatgcccgccagttcctggagatgatgcagaagccggatgtcgaccagatcgac ggcctgtcgccggccatctccattgagcagaagacgacctcgaagaacccgcgctcgacc gtcggcacggtcaccgagatctacgactacatgcgcctgctcttcgcgcgcgtcggcgtg ccctattcgccggcgaccggcctgccgatcgagagccagacggtcagccagatggtcgac cgcgtcatcgacttcggcgagggaacgcgcctctacatcctcgcgcccgtcgtgcgcggc cgcaagggcgagtacaggaaggaactcgccgaattgatgaagaaggggttccagcgcgtt aaggtcgacggccagttctacgagatcgccgacgtgccggcgctcgacaagaaatacaag cacgacatcgacgtggtggtcgaccgcgtcgtcgtgcgcccggacctttcctcgcgcctg gcggacagcctcgagacctgcctgaagctcgcagacggcctggcgatcgccgaattcgcc gacaagccgctgcccgtcgaggagacgtcggccggcggctcggccaacaagtcgctgaac gacacgcacgagcgcgtgctgttttccgaaaagttcgcctgcccggtttccggcttcacc atcccggaaatcgagccgcggctcttctcgttcaacaacccgttcggcgcctgcccgacc tgcgacggcctcggcagccagcagaagatagacccggacctcatcgtgcccgaggcggag cgcacgctacgcgacggcgccatcgcgccctgggccaaatcctcctcgccctattacaac cagacgctggaagcgctcggcgccgcctatggcttcaagctctccagccgctggtcggaa ctgtcggaagccgcgcaggacgccatcctcaacggcacgaaggagaagatcgagttcaac tacaaggacggcgcgcgctcctacaagacggtgaaaaccttcgagggcatcgtgccgaac ctcgaacggcgctggaaggagaccgattccgcctggtcgcgggaagagatcgagcgttac atgtcggccgccccctgcccggcctgcaacggttttcgcctgaagccggaggcgctggcg gtgaagatcaacaggctgcatatcggcgaggcgacggccatgtcgatccgcgtcgcgcgc gactggttcgaggcgctgccggagcacctcaatgccaagcagaacgagatcgccgtccgc atcctcaaggagatccgcgagcgtctgcgcttcctcaacgatgtcggcctcgaatatctt tcgctctcgcgcaattccggcacgctgtcgggcggcgagagccagcgcatccgcctcgcc tcgcagatcggctcgggcctgacgggcgtgctctacgtgctggacgagccctccatcggc ctgcaccagcgcgacaatgcgcgcctgctcgatacgctgcggcacctgcgcgacatcggc aacaccgtcatcgtcgtcgagcatgacgaggacgcgatcctgacggcggactacgtggtc gatatcggtcccgccgccggcatccatggcggcgaggtgatcgcgcagggcacgcccggc gaggtcatcgccaacccggcctcgctgacggggaaatacctgtcgggcgaacttgccgtc gcggttccggcggagcgccgcaaaccgaagaaaaagaaggaaatcaaggtcgtcggcgcg aaagcgaacaatctgaagaatgtcacggcatcgatcccgctcggcgtcttcacggcggtc acgggcgtttcgggcggcggcaagtcgaccttcctcatcgagacgctctacaagtcggcc gcccgccgcatcatgggcgcgcgcgaaatcccggccgagcatgagcgcatcgacgggttc gaatatatcgacaaggtcatcgacatcgaccagtcgccgatcggccgcacgccgcgctcc aacccggcgacctataccggcgccttcacgccgatccgcgactggttcgccggcctgccg gaggcgaaggcccgcggctaccagcccggccgcttctccttcaacgtcaagggcggacgc tgcgaggcctgccagggcgacggcgtcatcaagatcgagatgcacttcctgcccgacgtc tacgtcacctgcgacgtctgccacggcaagcgttacaaccgcgagacgctcgacgtcacc ttcaagggcaagtcgatcgccgacgtgctcgacatgacggtggaggaaggcgtcgagttc ttcgccgccgtgccggccgtgcgcgacaagctgacgacgctgaatcaggtcggcctcggc tatatcaaggtcggccagcaggcgaacacgctgtcgggcggcgaggcgcagcgcgtcaag ctcgccaaggaactgtcgaagcgctcgaccggccgcacgctctacatcctcgacgagccg acgacgggcctgcacttccatgacgtggcgaagctgctcgaagtgctgcacgaactggtc aaccagggcaattcggtcgtcgtcatcgagcacaatctggaggtcatcaagaccgccgac tggatcatcgacttcggcccggaaggcggcgacggcggcggcgaggtgatcgccgagggc acgccggaggacgtggtgaaggtggagcgctcctataccggccacttcctccgggaattg ctggaacgccggccgatgaagaaggtcgcggcggagtaa

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