Shinella sp. HZN7: shn_08890
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Entry
shn_08890 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
shn_08890
Enzymes [BR:
shz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
shn_08890
Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
shn_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
ANH06659
UniProt:
A0A1A9G8N5
LinkDB
All DBs
Position
complement(1838864..1839859)
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AA seq
331 aa
AA seq
DB search
MIATRFGTSLRLLTIPLVCAGLAACATTTPAPKKKVRSKEYFSEAEYGVKASPRVVEEGQ
PVPKGGGRYQVGKAYQVRGKWYQPKEEPGYNKTGLASWYGSAFHGRKTANGEVYDKYHLS
AAHPTFPLPSYARVTNLENGTSVVVRVNDRGPYHEGRVIDVSSKTADLLDMKRTGTAKVR
VQYVGKAPLEGNDMPYLMASYVTKGSRVPAVDPGGQIATGVMVASADNSMLPGVGQGEGI
LRVPAESTMTALAKTAPASDAFQVMEQFVMLPDIGPLPIERPNFVPQLSADPSYAAAYAD
ERVRDAAGAFDAILTIDGKLTPLSALADNAG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atcattgcgacccggttcggcacgagcctgcggttgttgactattccgctggtctgcgcg
ggtcttgccgcctgtgcgacgaccacgccggcgcccaagaagaaggtgcgcagcaaggaa
tacttctccgaggccgaatacggtgtgaaggccagcccgcgcgtcgtcgaggaaggccag
cccgtgcccaagggcggcggccgttaccaggtcggcaaggcctaccaggttcgcggcaag
tggtatcagccgaaggaagagccgggctacaacaagaccggccttgcctcctggtacggt
tccgccttccatggccgcaagacggcgaatggcgaggtctacgacaagtatcatctctcc
gccgcgcatccgaccttcccgctgccgagctacgcgcgcgtcaccaatctggagaacggc
acctccgtcgtggtgcgcgtcaacgatcgcggcccctatcatgagggccgggtgatcgac
gtttcctccaagacggccgacctgctcgacatgaagcgtaccggcacggccaaggtgcgc
gttcaatatgtcggcaaggcgccgctcgagggcaacgacatgccctatctcatggcgtcc
tacgtcaccaagggctcgcgcgttccggcggtcgatccgggcggccagatcgccacgggc
gtcatggtggcctcggccgacaacagcatgctgccgggcgtcggccagggcgagggcatc
ctcagggttcccgccgaaagcacgatgacggcccttgccaagacagcgccggcaagcgac
gccttccaggtcatggagcagttcgtcatgctgcctgacatcggcccgctgcccatcgag
cggccgaatttcgtgccgcagctttccgccgatccgagctatgccgcagcctatgcggac
gagcgcgtgcgggatgccgccggcgccttcgatgccatcctgacgatcgacggcaagctg
acgccgctctcggcgcttgccgacaacgcgggctga
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