Shinella sp. HZN7: shn_08905
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Entry
shn_08905 CDS
T04278
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00550
Peptidoglycan biosynthesis
shz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
shn_08905
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shz01002
]
shn_08905
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
shn_08905
Enzymes [BR:
shz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
shn_08905
Peptidases and inhibitors [BR:
shz01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
shn_08905
Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
shn_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
SPOR
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ANH04144
LinkDB
All DBs
Position
1841408..1842871
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AA seq
487 aa
AA seq
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MCNPRMKSNVVSRSVFLDFLPRSCQAFAIAAKGLVMIGMVATVAVATPAEANPKYSGIVI
DAKTGKVLYSEDADALRYPASLTKMMTLYLTFEALEAGKIRLDTRVPFSKNAASEPPTKL
GVGAGNSITVEQAMLGLITRSANDASTALAEFLGGSEERFARMMTQKARALGMTRTVYRN
ANGLPNTAQVTTARDQARLGIALRQHFPQYYDYFSVRSFRFGKQTINGHNRLLGTVRGVD
GIKTGYTRASGYNLVTSAVADGRSVVGVVIGGRSGAARDQQMRKLIATYMPKASRRGSGD
LIAETKDAPTLTAEVASKATTASVSGSLDLPENGPIPTYRYNEARIETAYAATSSSEVVG
KRALAATLKIQRDAAVPPADLTEQGDTGGSLDELTTSSTVVSNAVPSGWVIQIGATPDKG
QAQDLLAKAKSQGGKALSSAQPFTVAVNSGSQQLFRARFGGFDNQNGATAACNALKRKGF
ACWASQQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatccgagaatgaagagtaacgtagtgtcccgttccgtattcctcgatttcctc
ccccgctcctgccaggcatttgccattgcggcgaaaggtctggtgatgatcggaatggtc
gccaccgtcgccgtcgccacaccggcagaagccaatccgaaatattccggcatcgtcatc
gacgccaagacgggcaaggtgctctacagcgaggatgcggacgcgctgcgttatcccgca
tcgctcaccaagatgatgacgctgtacctcaccttcgaggcgctggaggccgggaagatc
cgcctcgacacccgcgtccccttctccaagaacgccgcgagcgagccgccgacgaagctc
ggtgtcggcgccggcaattcgatcaccgtcgaacaggcgatgctcggcctcatcacccgc
tcggcgaacgacgcctccacggcgctcgccgaattcctcggcggttcggaagagcgcttc
gcccgcatgatgacgcagaaggcgcgcgcgctcggcatgacgcgcaccgtctaccgcaac
gccaacggccttcccaatacggcgcaggtgaccaccgcccgtgaccaggcccgcctcggc
atcgcgctgcgccagcatttcccgcaatattacgattatttctcggtccgcagcttccgc
ttcggcaagcagaccatcaacggccacaaccggctgctcggcaccgtgcgcggcgtcgac
ggcatcaagaccggctatacccgcgcttccggctacaacctcgtgacctcggccgtggcc
gacgggcgcagcgtcgtcggcgtcgtcatcggcggccgctcgggtgcggcccgcgaccag
cagatgcgcaagctgatcgccacctacatgccgaaggcctcgcgccgcggcagcggcgac
ctgatcgccgaaaccaaggatgcgccgacgttgaccgccgaagtcgccagcaaggcgacg
accgcatcggtttccggtagcctcgacctgccggagaacggcccgatcccgacctatcgc
tacaacgaggcccgcatcgagacggcctatgccgcaacgtcgagctcggaagtcgtcggc
aagcgtgcgctcgccgcaacgctgaagatccagcgcgacgccgccgtgccgccggcggac
ctgacggaacagggcgatacgggcggctcgctcgacgagctgaccacctcctccaccgtc
gtctcgaatgccgtgccctccggctgggtcatccagatcggcgcgacgcccgacaagggc
caggcacaggatctgcttgccaaggcgaagagccagggtggcaaggcgctttccagcgca
cagcctttcaccgtcgccgtcaacagcggcagccagcagctgttccgcgcccgcttcggc
ggcttcgacaaccagaacggcgcaacggcagcctgcaacgcgctgaagcgcaagggtttc
gcctgctgggccagccagcagtaa
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