Shinella sp. HZN7: shn_09995
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Entry
shn_09995 CDS
T04278
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shz01002
]
shn_09995
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
shn_09995
Peptidases and inhibitors [BR:
shz01002
]
Cysteine peptidases
Family C82
shn_09995
Peptidoglycan biosynthesis and degradation proteins [BR:
shz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
shn_09995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF1843
Motif
Other DBs
NCBI-ProteinID:
ANH04341
UniProt:
A0A1A9G1L9
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Position
complement(2068950..2070824)
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AA seq
624 aa
AA seq
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MKLTKTAVLAATLALSCATVSLHATPANALTVMEWLNGKKKQKSEPLPGVTTGIALPGAE
VKQEAKPLPRVTGPRYYTYKADALKRVAVDKLADPVVTSSISADVAPAGDAGVRAAFSSI
DVRATPDAAKAVETFYGTQKKFVWIDGTGINDKAKTAIAVLADAASVGLDPWDYAVKIPA
ESFDGADMSARYSELAAFEVGLSAAVATYVQDAVRGRIDPNRISGYHDFKRKDVNLVAAL
KNVAMSSNVRGYLESRSPASADFQALKAELAKLKAETAGDDRVVIAEDTLLKPGQSNPEL
ANVVKGIVKHGSDALKTDHSLAIATYKDTPEYTPELVALVEAFQKENGLKPDGVVGKASI
RKLTGGDSVADKVAKLEVALEQARWLPVDLGARHVFINQPAFQVYYYEDGAEKFSMRTVV
GSKSNQTYFFEDKVQTVEVNPYWGVPQSIIINEMLPKLRNDPSYLDRMGYEVAVGGRAVA
SSSVNWYGSTAGVSVRQPPSGDNALGELKILFPNSHAIYMHDTPSKSFFKKDMRALSHGC
VRLAEPRKMAAAVLGISEEEVGREIAAGKNKALNVKADIPIYIAYFTAWPNKDGVVEYFD
DVYDRDSYMRKAFAATQKARQIEG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccaagactgccgtgctggccgccacgctggccctttcctgcgccaccgtt
tcgctccatgcgacacccgccaacgccctgaccgtgatggaatggctgaacggcaagaag
aagcagaagtccgagccgcttccgggcgtcacgaccggtattgcactgcccggcgccgag
gtgaagcaggaggccaagccgctgccgcgcgtcaccggcccgcgctactacacctacaag
gcggacgccctgaagcgcgtcgccgtcgacaagctggccgacccggtcgtcaccagctcc
atctcggccgatgtcgcgccggccggcgatgccggcgtgcgcgccgccttctccagcatc
gacgtgcgtgcgacgcccgatgccgccaaggcggtcgagaccttctacggcacgcagaag
aaattcgtctggatcgacggtaccggcatcaacgacaaggcgaagaccgccatcgccgtg
ctggccgacgcggcctccgtcggcctcgacccctgggactatgcggtcaagattccggcg
gaaagcttcgacggcgccgacatgagcgcgcgctacagcgagcttgccgccttcgaggtc
ggcctttccgccgccgttgccacctatgtgcaggacgccgtgcgcggccgcatcgatccg
aaccggatttccggctaccacgatttcaagcgcaaggacgtcaacctcgtcgcggcgctg
aagaacgtggcgatgagcagcaatgtcaggggctatctcgaaagccgctcgccggcgagc
gccgatttccaggcgctgaaggcggagcttgccaaattgaaggccgagacggcgggcgat
gaccgcgtcgtcatcgccgaggacacgctgctgaagccgggccagagcaatccggagctc
gccaatgtcgtcaagggcatcgtcaagcacggttcggatgcgctgaagaccgatcattcg
ctcgccatcgccacctacaaggacacgccggaatacacgcccgaactggtcgcgctcgtc
gaagccttccagaaggagaacgggctgaagccggacggcgtcgtcggcaaggcgtcgatc
cgcaagctcacgggcggcgattcggtcgccgacaaggtcgccaagctggaagtggcgctg
gaacaggcgcgctggctgccggtcgatctcggcgctcgccacgtcttcatcaaccagccg
gccttccaggtctattactacgaggacggtgcggaaaaattctcgatgcgcacggtggtc
ggctcgaagtcgaaccagacctatttcttcgaggacaaggtgcagaccgtcgaggtgaat
ccctattggggcgtgccgcagtcgatcatcatcaacgagatgctgccgaagctccggaac
gacccgtcctatctcgaccgcatgggctacgaggtcgccgtcggggggcgcgcggtggcg
tcctcctcggtcaactggtacggctcgaccgcgggcgtctccgtgcgccagccgccaagc
ggcgacaatgcgctgggggaactgaagatcctgttcccgaacagccatgccatctacatg
cacgacacgccgtcgaagagcttcttcaagaaggacatgcgggcgctgagccatggctgc
gtgcgccttgccgagccgcgcaagatggcggccgccgtgctgggcatcagcgaggaggag
gtcggcagggaaatcgccgccggcaagaacaaggcgctgaacgtcaaggccgatatcccg
atctacatcgcctacttcaccgcctggccgaacaaggacggcgtggtcgagtatttcgac
gacgtctatgatcgcgacagctacatgcgcaaggcctttgccgccacgcagaaggcgcgg
cagatcgagggctga
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