Shinella sp. HZN7: shn_12555
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Entry
shn_12555 CDS
T04278
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_12555
Transporters [BR:
shz02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
shn_12555
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF6688
Motif
Other DBs
NCBI-ProteinID:
ANH04787
UniProt:
A0A1A9G0T8
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Position
complement(2612512..2613900)
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AA seq
462 aa
AA seq
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MHMAPHRGNNGWGAHFRATFALGVPLIGAQLAQLGIHTTDVVILGRLGAAHLAAIVLSSA
FFFTIFILGSGFANAVMPMVAQAYGRGDPVSVRRSVRMGMWVVLLYSVLMIPLFYNAESI
LLLAGQKPDVAALAGTYLKIAQWGMAPGLLFMTLRGLVSAHGRAGIVLYVTIIILSVNAF
FAYALVLGRFGFPAMGMKGAAIVSFGVNLLSFVLLTAYIQSRPDMRRYELFVRFWRPDWL
AFHEVVHLGLPIGLTMLAEVSLFSGASLLMGNIGTLELAAHGIALQLASIAFMVPLGLAQ
AGTVRVGVAHGQGDHLGVVRASWAVLAIATVIAVGGGVLFALIPTTLASIFLDKAGADSA
AVLAIAGPFVVIAGIFQLVDGLQAIAAGLLRGLKDTRIPMILALISYWPIGFLAAWFFAF
PAGFGGIGVWFGFLCGLSAASILLNWRFYRLVTRGMPAARPI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggcaccgcatcgcgggaacaatggctggggcgcgcattttcgcgcgaccttt
gccctcggcgtaccgttgatcggcgcgcagctcgcccagctcggcattcacacgaccgac
gtggttattctcggccgcctcggcgccgcgcatctggcggcgatcgtgctgtcgagcgcg
ttcttcttcaccatcttcatcctcggttcgggttttgccaatgccgtcatgcccatggtg
gcgcaggcctatggccgcggcgacccggtgtccgtgcggcgctccgtgcgcatgggcatg
tgggtggtgctgctctattccgtgctgatgatcccgctcttctacaatgcggagagcatc
ctgctccttgccggccagaagccggatgtggcggcgctggccggcacctacctgaagatc
gcccagtggggcatggcgcccgggctgctcttcatgacgctgcgcggcctcgtcagcgcg
catggccgggccggaatcgtgctctatgtcacgatcatcatcctgtcggtcaacgccttc
ttcgcctatgcgctggtgctcggccgtttcggcttcccggcgatgggcatgaagggggcg
gccatcgtctcgttcggcgtcaatctgctgagcttcgtgctgctgacggcctatatccag
tcgcgccccgacatgcgccgctacgagctcttcgtgcgcttctggcggccggactggctg
gccttccacgaggtcgtccatctcggcctgccgatcggcctcaccatgctggcggaggtc
agcctcttcagcggcgcttcgctgctgatgggcaatatcggcacgctggaactggcggcc
cacggcatcgcgctccagctcgcctccatcgccttcatggtcccgctcggcctcgcgcag
gccggcacggtgcgcgtcggcgtggcgcatggtcagggcgatcacctcggcgtcgtgcgc
gcctcctgggcggtgctggcgatcgcgacggtgatcgcggtcggcggcggcgtgctcttc
gcgctcattcccacgacgcttgcctcgatcttcctcgacaaggcgggcgcggattcggcc
gcggtgctggccatcgccggccccttcgtggtgatcgccggcatcttccagctcgtcgac
ggcctgcaggcgatcgccgccggcctgctgcgcgggctgaaggacacgcgcatcccgatg
atcctcgcgctgatctcctactggccgatcggcttccttgccgcctggttcttcgccttc
ccggccggcttcggcggcatcggcgtctggttcggtttcctctgcggcctttcggcagcg
tccatcctgctcaactggcgcttctaccgcctggtgacgcggggcatgccagccgcccgg
ccgatatga
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