Shinella sp. HZN7: shn_13230
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Entry
shn_13230 CDS
T04278
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_13230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_13230
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
shn_13230
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
DUF3464
Motif
Other DBs
NCBI-ProteinID:
ANH04903
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Position
2749564..2750436
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AA seq
290 aa
AA seq
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MDWLTVSKIPIGPIAKDAVSWLTTNGKGLFDFLKVFLQAGIDAVLFLLQGPFSSAGGRFG
YALFLILLVTGLSWWFRRSIGVAAFTFLGLLLIVNQGYWKETTETLALVLAATGVSMVVG
VPLGIAAARRPWFYSILRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPI
RLTRLGIISTPPSLVEAAQAFGATPGQVLRKVELPFATPQIMAGLTQTIMLSLSMVVIAA
LVGAKGLGVPVVRALNTVNISMGFEAGLCIVILAIILDRLFRAADDGDAK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggattggcttaccgtttccaaaattccgatcggcccgatcgccaaggacgccgtcagt
tggctgacgacgaacggcaagggattgttcgacttcctgaaggtcttcctgcaggccggc
atcgatgccgtgctcttcctgctgcagggaccgttttccagcgccggcggcaggttcggc
tatgcgctgttcctcatcctgctcgtgacgggtctgagctggtggttccgccgctcgatc
ggcgtcgccgccttcaccttcctcggcctcctgctcatcgtgaaccagggctactggaag
gagacgacggagacgttggcgctcgtgctggcggcgaccggcgtcagcatggtcgtcggc
gtgccgctcggcatcgccgccgcgcgccggccgtggttctattcgatcctccggccgatc
ctcgatctcatgcagacgatccccaccttcgtctatctcatcccggcccttatcctcttc
ggcctcggcatggtgcccggcctcatcgccacggtcatcttcgccatccccgcaccgatc
cgcctcacccggctcggcatcatctcgacgccgccctcgctggtggaagcggcccaggcc
ttcggcgcgacgcccggccaggtgctgcgcaaggtggaactgcccttcgccacgccgcag
atcatggccggcctcacccagaccatcatgctctcgctgtcgatggtggtcatcgccgcg
ctcgtcggcgccaaggggctcggcgttcccgtggtgcgcgcgctcaacaccgtgaacatc
tccatgggcttcgaggcgggcctgtgcatcgtgatcctcgcgatcatcctcgaccgtctc
ttccgcgccgccgatgatggagacgccaaatga
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