Shinella sp. HZN7: shn_14815
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Entry
shn_14815 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
shz
Shinella sp. HZN7
Pathway
shz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
shn_14815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_14815
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
shn_14815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ANH05176
UniProt:
A0A1A9G253
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All DBs
Position
3063068..3063790
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AA seq
240 aa
AA seq
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MMIVKVFDVETTGMPNDDGKPVGLLEVGWTDVALDPDGREVLRISEPTSHFCNPFRAAPG
LEIEPGAAAAHHITREDVADAPSPEFVLRSLMSGADAFACHNKEFDGRFFTGGEKPFACT
LRAARAIYPDAERHNNQFLRYHLGLPVDRQIAEVAHRAGPDSHVTAHLLAHMIGEGHSFA
ELLRITDGPIRIKRMPFGEHRGKPIDEIPEGYLRWMNGRKLDRDLRFTLNRVLKERGIRV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgtcaaggttttcgatgtcgagacgacggggatgccgaacgacgacggcaag
ccggtcggcctcctcgaagtcgggtggaccgatgtcgctctcgatcccgatggccgggag
gtcttgcggatcagcgagcccacctcgcatttctgcaatcccttccgtgcagcgcctggc
ttggagatcgagcccggcgctgcggcagcccatcacatcacccgcgaggatgtcgccgac
gccccctcgcccgaattcgtgctccgctctctcatgagcggggccgatgccttcgcctgc
cacaacaaggaattcgacggccggttctttaccggcggagagaagcccttcgcgtgcacc
ctgcgcgccgccagggcgatctatcccgacgcggagcggcacaacaaccagttcctccgc
tatcacctcggcctgccggttgaccggcagattgcagaggtggcgcaccgcgccggccct
gacagccatgtgaccgcgcatttgctcgcccacatgatcggagaaggccattccttcgcg
gagcttctgcgcatcacggacggtccgatccgcatcaagcggatgccgttcggggagcat
cggggaaagccgatcgacgaaatccccgaaggatatctccgctggatgaacggtcggaag
ctcgatcgcgatctccgcttcaccctcaaccgtgtcctgaaagagcggggtatccgcgta
tga
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