Shinella sp. HZN7: shn_15030
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Entry
shn_15030 CDS
T04278
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
shz
Shinella sp. HZN7
Pathway
shz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
shn_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_15030
Enzymes [BR:
shz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
shn_15030
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
shn_15030
RecFOR pathway proteins
shn_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_14
Rad17
AAA_22
AAA_2
AAA_16
nSTAND3
AAA_17
AAA_18
RNA_helicase
AAA_33
AAA_28
TsaE
NTPase_1
IstB_IS21
DUF815
AAA_24
ABC_tran
NB-ARC
Bac_DnaA
Cytidylate_kin
Sigma54_activ_2
AAA_7
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANH05214
UniProt:
A0A1A9G2U3
LinkDB
All DBs
Position
complement(3104155..3105195)
Genome browser
AA seq
346 aa
AA seq
DB search
MSDENRLLSPEKRGEDIDTALRPQTLDDFTGQAEARANLKIFIEAAKNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TQKIADEALTRLLVDNMGLDQLDRRYLSMIAHNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTVNAWKHLGLTPPKDLEATQFRLFSEDD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgagaacagactgctttcgccggaaaagcgcggcgaggacatcgataccgcc
ttgcggccgcagacgctggacgatttcaccggccaggcggaggcgcgcgcgaacctcaag
atcttcatcgaggcggcgaagaaccgcggcgaggcgctcgaccatgtgctcttcgtcgga
ccgcccggcctcggcaagacgacgctggcgcagatcatggcgaaggaactcggcgtcaat
ttccgctcgacctccggtcccgtcatcgcgaaggccggcgaccttgcggcgctgctgacc
aatctcgaagagcgcgacgtgctcttcatcgacgagatccatcgcctcaacccggccgtc
gaggaaatcctctatccggccatggaggatttccagctcgacctcatcatcggcgaaggc
ccggctgcccgctcggtgaagatcgacctgtcgaaattcaccctcgtcgccgccaccacg
cgcctcggcctcctcaccacgccgctgcgcgaccgtttcggcattccggtgcggctcaat
ttctataccgtggaggagctggaactgatcgtgcgccgcggtgcaaggctgatggggctc
ggcatgacggacgagggcgcacgcgagatcgcgcggcgcgcgcgcggcacgccgcgcatc
gccgggcggttgcttcgccgcgtgcgcgacttcgccgaagtggcgcgggcggaggcggtg
acgcaaaagatcgccgacgaggcgctgacgcggctgctcgtcgacaatatgggcctcgac
cagctcgaccggcgctatctttcgatgatcgcccacaatttcggcggcggaccggtcggc
atcgagaccattgcggcggggctttccgagccgcgcgatgcgatcgaggacatcatcgag
ccctacatgatccagcagggtttcatccagcgcacgccgcgcggccgtgtcctgacggtg
aacgcctggaagcacctcgggctgacgccgccgaaggatctcgaggcgacccagttccgg
cttttttccgaagacgactga
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integrated database retrieval system
