Shinella sp. HZN7: shn_15165
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Entry
shn_15165 CDS
T04278
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_15165
Transporters [BR:
shz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
shn_15165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
AAA_23
RsgA_GTPase
AAA_30
ATP-synt_ab
AAA_25
DUF805
AAA_21
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
ANH05238
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All DBs
Position
3126527..3128350
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AA seq
607 aa
AA seq
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MVSTDKEQGVQEKSARRNIRPLGRLAPYISRYRGLVAGALAALVMAAVTTLALPLAVRRM
IDHGFSGADAGFINTYFTMLFALAGLLALASAMRYYFVITLGERIVADLRRDVFSHVTKL
SPAFFDVNQSGEIVSRLTADTTQIKSAVGATASVALRNLILCFGAIAMMVYTSPKLSSLV
IAAIPVIVFPLVAFGRSVRRRSREAQDTLAAASAYAGEAIGATRTLQAFNAEDAARARFF
GAVEQAYGAARSAIRARSLLTGFAIAMIFGSVVAVLWFGARDVLSGTLSAGTLGQFLLYA
VFAAGSLGALSEVWGELSQAAGAAERLTELLAEPPAIAAPANPVALPLPARGELAFHDVH
FSYPARPGYRSINGLTFAVKQGETVAIVGPSGAGKSTILSLVLRFYDPDTGTVFLDGVDL
RTADPEELRRRIALVPQDVTIFAATIRDNIAFGMSGVSDEAVRAAARAAQAEEFIERLDK
GYDTMVGERGVTLSGGQRQRIAIARAILKDAPLLLLDEATSALDAESETLVQKALDGQMG
KRTTIVIAHRLATVLKADRILVMEAGRIVEEGTHQSLIRQDGLYARLARLQFDHGGQAFL
GEDRAVG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccacagacaaagagcagggcgtgcaggaaaaatcggcacgccgcaacattcgt
ccgctgggcaggcttgctccctacatcagtcgttatcgcgggctcgtcgccggggcgctg
gctgcgctcgtcatggccgccgtcaccacgctcgccctgccgctcgccgtgcgccgcatg
atcgaccatggcttttccggcgccgatgccggcttcatcaacacctacttcacgatgctc
ttcgcactggccggcctgctcgcgctggcgagcgccatgcgctactacttcgtcatcacg
ctcggcgagcgcatcgtggcggacctgcgccgcgacgtcttttcccatgtgacgaagctt
tcgcccgccttcttcgacgtcaaccagtccggcgagatcgtctcccggctgaccgccgac
acgacgcagatcaagtctgccgtcggcgccaccgcctccgtcgcgctgcgcaacctcatc
ctctgtttcggcgccatcgccatgatggtctataccagcccgaagctctccagcctcgtg
atcgccgccattcccgtcatcgtcttcccgctcgtcgccttcggccgctcggtgcgccgc
cgctcgcgcgaggcgcaggacacgctggcagccgcctccgcctatgccggcgaggcgatc
ggcgccacgcgcacgctgcaggccttcaatgcggaagacgccgcccgcgcccgcttcttc
ggcgcggtcgagcaggcctacggcgccgcgcgctcggccatccgcgcccgctcgttgctg
accggtttcgccatcgccatgatcttcggctcggtcgtcgccgtgctgtggttcggcgcc
cgcgacgtgctgtcgggcacgctttcggccggcacgctcggccagttcctgctctacgcg
gtctttgccgccggcagcctcggcgcgctgtccgaagtctggggcgagctttcgcaggcc
gccggcgccgccgagcgcctgaccgaacttctggccgagccgcccgccatcgccgcgccg
gcaaacccggtggccctgccactgcccgcgcgcggcgaactcgccttccacgacgtgcac
ttctcctatcccgcccgtcccggctatcgcagcatcaacggcctgacctttgcggtgaag
caaggcgagaccgtcgccatcgtcggcccctccggcgccggcaagagcacgatcctctcg
ctggtgctgcgcttctacgatcccgacacgggcacggtgtttctcgacggcgtcgatctg
cgcacggccgatccggaagagctgcgccgccgcatcgcgctcgtaccgcaggacgtcacc
atcttcgccgcgaccatccgcgacaacatcgccttcggcatgtccggcgtcagcgacgag
gccgtgcgggccgcggcaagggcggcgcaggcggaagagttcatcgaacggctcgacaag
ggctatgacaccatggtcggcgaacgcggcgtcacgctgtcgggcggccagcgccagcgc
atcgccatcgcccgcgccatcctcaaggacgccccgctgctgctgctcgacgaggcgacc
tccgccctcgacgcggaaagcgagacgcttgtccagaaggccctcgacggccagatgggc
aagcgcacgacgatcgtcatcgcccatcgtcttgccaccgtgctgaaggccgaccgcatc
ctcgtcatggaggcgggccgcatcgtcgaggaaggcacccaccagtcgctcatccggcag
gacggcctctacgcccgcctcgcccgcctgcagttcgaccacggcggccaggccttcctt
ggagaggaccgcgccgtcggctga
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