Shinella sp. HZN7: shn_15685
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Entry
shn_15685 CDS
T04278
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00330
Arginine and proline metabolism
shz00480
Glutathione metabolism
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz04148
Efferocytosis
Module
shz_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
shn_15685
09106 Metabolism of other amino acids
00480 Glutathione metabolism
shn_15685
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
shn_15685
Enzymes [BR:
shz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
shn_15685
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HyfR_N
Motif
Other DBs
NCBI-ProteinID:
ANH06799
LinkDB
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Position
complement(3246635..3247768)
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AA seq
377 aa
AA seq
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MTSARIIDFLNTRRPDGPCLVVDLDVVRDNFKAFRHALPDSAIYYAVKANPAPEILRLLA
SMGSNFDCASVAEIEMALDAGATASRISFGNTIKKERDVAKAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVSYGVSFHVGSQ
MTKLDAWDSALADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALK
KHFGNQIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTVRDQDAMEPCVLAGPTCDSADVMYEKNMYPLPITLSIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgcacgtattatcgacttcctgaacacccgacgtcccgacggcccgtgcctc
gtggtcgacctcgatgtcgtgcgggacaatttcaaggccttccgccacgcgctgcccgac
agcgccatctactatgccgtcaaggccaacccggcgccggagatcctgcgcctgctcgcc
tccatgggctccaacttcgattgcgcgtccgtcgccgagatcgaaatggcgctcgatgcc
ggcgcgaccgcttcccgcatctccttcggcaacacgatcaagaaggagcgtgatgtcgcc
aaggcgcatgcgctcggcgtctcgctcttcgccgtcgacagccatgaggaagtggagaag
atttcccgtgccgcgcccggcgcgcgcgtgttctgccgcgtgctgacggatggcgaaggc
gccgaatggccgctgtcgcgcaagttcggctgcgtgccgcagatggccgtcgacgtgctc
gtctacgcccaccagctcggcctggtgtcctacggcgtgtcgttccacgtcggctcgcag
atgacgaagctcgatgcctgggattcggcgcttgccgatgccaagcgcgtcttcgtgcag
cttgccaagcagggcatcgaactcaagatggtcaacatgggcggcggtttcccgacgaag
tacctgcgcgacgtgccctccgccgaagcctatggccaggcgatcttcggcgcgttgaag
aagcacttcggcaaccagatcccggaaaccatcatcgagccgggccgcggcatggtcggc
aatgcgggcgtcatcaaggcggaagtcgttctcgtctcgaagaagtccgacaatgacaac
caccgctgggtcttcctcgacatcggcaagttcggcggtctcgccgaaaccatggacgag
gcgatccgctacccgatccgcaccgtgcgcgatcaggatgcgatggagccctgcgtgctc
gccggcccgacctgcgattcggccgacgtgatgtacgagaagaacatgtatccgctgccg
atcaccctttcgatcggtgacgaggtcctgatcgagggcaccggcgcctatacgacgacc
tactcggccgtcgccttcaacggcttcgagccgctcaaggcctacgtcatctga
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