Shinella sp. HZN7: shn_16000
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Entry
shn_16000 CDS
T04278
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00071
Fatty acid degradation
shz00362
Benzoate degradation
shz00650
Butanoate metabolism
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
shz01200
Carbon metabolism
shz01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
shn_16000
09103 Lipid metabolism
00071 Fatty acid degradation
shn_16000
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
shn_16000
Enzymes [BR:
shz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
shn_16000
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
TrkA_N
Pyr_redox_2
ApbA
Pyr_redox
NAD_binding_8
FAD_binding_3
NAD_Gly3P_dh_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ANH05386
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Position
complement(3320623..3322683)
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AA seq
686 aa
AA seq
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MTVTIARENAIAVVTVDNPPVNALSQALRQALVEAVATLDADAAVKAVVLICAGRTFIAG
ADVGEFGKPPQPPHLPDVVATIEGAKTPWVAAIHGSALGGGLEVALGCAWRVAVPSAGLG
LPEVKLGIIPGAGGTVRLPRLIGPAAAVDLVTSGSPVGAKKAEGLGLIDAVVDGDLRAGA
IAFANDIAGKVRPQPVSSRAVAPVEAGFWESAEKAVAGKAKREVAPLRALASVWKASETD
FASAMAFERETFLELRGSQQAAALRHVFFAERAAPRPPELAGVTPRAIRSAAVIGGGTMG
AGIAAALRDAGLPVVLIERDAAAVERGFANVRGIYEGSVKRGRIPQAVADERMAGITGGD
DYGLLVDTDLVIEAVFEDLVVKRAVFERLSAVCRPDAVLATNTSYLDPDAISEGVSHPER
FLGLHFFSPAQIMKLLEIVPTEATAPEVLATGFALARLLGKIPVRAGICDGFIGNRILKV
TRAQAERLLLSGATPAAVDAAMRAFGLPMGPFEAQDLGGLDIAAFQRKAARERGETPFAP
VADRLCALGRYGQKTGGGWYDYQPGDRAPKSSETVAAIIAEAAEGRAQRTWDEAGIVDAI
LLPMVNEATRILEERVALRAADIDLVKIHGYGFPRWRGGPMHHAEARGLSAVVAVLDRLA
ADGLAEPTSDSLRRAAEAGGFSVLAG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaccatcgcccgcgaaaatgccatcgccgtcgtcaccgtcgacaacccgccc
gtcaacgcgctgtcgcaggcgctgcgccaggccctcgtcgaggccgtcgccacgctcgat
gcggacgcggcggtgaaggcggtcgtcctgatctgcgccggccgcaccttcattgccggg
gcggatgtcggcgaattcggcaagccgccgcagccgccgcatctgccggatgtggtggcg
accatcgagggggcgaagacgccgtgggtcgcggcgatccatggcagcgcgctcggcggc
gggctcgaagtggcgctcggctgcgcctggcgcgtggcggttcccagcgccggcctcggc
ctgccggaagtcaagctcggcatcatccccggcgcgggcggcacggttcgcctgccgcgg
ctgatcggcccggccgctgccgtcgaccttgtgacgagcggcagcccggtcggtgcgaag
aaggcggaagggcttggcctgatcgacgccgttgtcgacggcgatctgcgggccggcgcg
attgcctttgcgaacgacattgccggcaaggtccggccgcagccggtctccagccgcgcc
gtggcccccgtcgaggcgggtttctgggagagtgccgaaaaggccgtggcgggcaaggcg
aagcgggaagtcgcaccgctccgggcgcttgcctcggtgtggaaggcgagcgagacggat
ttcgccagcgccatggcgttcgagcgggaaaccttcctcgaactgcgcggctctcagcag
gcagcggcgctgcgccatgtcttctttgccgagcgcgccgcgccgcgcccgccggagctt
gccggcgtcacgccgcgcgccatccgttcggccgccgtcatcggcggcggcacgatgggc
gcgggcattgccgcggcgctgcgcgatgccggcctgccggtcgtcctcatcgagcgcgac
gcggcggccgtcgagcgcgggtttgccaatgtgcggggcatctatgaaggctcggtgaag
cgcggccgaatcccgcaggccgtggcggacgagcgcatggccggcatcaccggcggcgat
gattacggcctgctggtcgatacggacctcgtcatcgaggcggtcttcgaggatctcgtc
gtcaagcgcgccgtcttcgaaaggctctcggcggtctgccggccggatgcggttctggcc
accaacacgtcctatctcgatcccgacgcgatcagcgaaggcgtcagccatccggaacgc
ttcctcggcctgcatttcttcagcccggcgcagatcatgaagctcttggagatcgtgccg
acggaggcgaccgcgccggaggtgctggcgaccggtttcgcgctcgcccgcctgctcggc
aagatcccggtgcgcgccggcatctgcgacggtttcatcggcaaccgcatcctgaaggtg
acgcgggcgcaggccgagcggcttttgctgtcgggcgcgacgcccgcggcggtcgatgcc
gccatgcgtgccttcggcctgccgatggggcctttcgaggcacaggatctcggcggcctc
gacatcgcggccttccagcgcaaggcggcgcgcgaacggggcgagacgcccttcgcaccc
gttgccgaccggctctgcgccctcgggcgctacggccagaagaccggcggcggctggtac
gactaccagccgggcgaccgtgcgccgaaatcctcggaaaccgtggcggcgatcatcgcc
gaggcggcggagggccgggcgcagcggacatgggacgaggcaggtatcgtcgacgccatt
ctcctgcccatggtcaacgaggcgacgcgcatcctggaagagcgcgtggcgctgcgcgcc
gccgatatcgatctcgtgaagatccatggctacggcttcccgcgctggcgcggcgggccg
atgcaccatgccgaggcgcgcgggctgtccgcagtggtggcggtgctggatcgccttgcg
gcggatggccttgccgaaccgaccagcgatagcctgcgccgggcggcggaggctggcggc
ttttcggtgcttgccgggtaa
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