Shinella sp. HZN7: shn_16130
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Entry
shn_16130 CDS
T04278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz01501
beta-Lactam resistance
shz02010
ABC transporters
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_16130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_16130
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
shn_16130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_16130
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
shn_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Rdx
Motif
Other DBs
NCBI-ProteinID:
ANH05412
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All DBs
Position
complement(3349712..3351307)
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AA seq
531 aa
AA seq
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MANRLVGFRAALLAGAILLGASPVLAETVLHRGNAGEPQTLDQAHTSINIEEFILKDLYE
GLTIYDASGKIVPGAAESWTISDDGTVYTFKLRGDAKWSDGSPVTAEDFVFSFTRVEDPK
TAAGYANILYPIKNAEKVNKGEAGLDQLGVKAVDATTLEVTLERPTPFFLELLAHQTALP
VSKASVEKNGADFVKPGVMVSNGAFKLASHVPNDNLVVEKNPNYWDAANVKLDKVIFYPI
DDQAASVRRFEAKEMDLVYNFSADQIERLKASYGEQVHVSPTLATYYYAFDTRQEPYSDV
RVRRALSMAVDRDFLAKEIYSGSQLPAYSMVPPGMEGYEPATADFGALSQLDREDEALKL
MKEAGYGEGGKPLKIEIRYNTNPNHERVATAVADMWKNTFGADVSMVNLDVSSHYAYLQE
GGAFNVARAGWVADYADAENFLALSVSTNKTFNYGKFENAEYDALMKQSYEEQGPAARAK
VLHEAEALLMKEQPIAPFLTQADLWLVSSKVQGWHDNAANQHLSRFLSVSE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagactcgttggctttcgtgcggctcttcttgcaggcgcaatcctgctgggc
gccagccctgtattggcggaaacggtgcttcaccgcggcaatgcgggcgaaccgcagacc
ctcgaccaggcgcacacttccatcaacatcgaggagttcatcctcaaggacctttacgaa
ggcctgaccatctatgacgcctcgggcaagatcgtgcccggtgcggcggaaagctggacc
atctccgatgatggcacggtctacacgttcaagctgcgcggcgacgcgaaatggtcggac
ggttccccggtgacggcggaggacttcgtcttctccttcacccgcgtggaggacccgaag
accgcggccggctacgccaacatcctctatccgatcaagaatgcggaaaaggtcaacaag
ggcgaggccggcctcgatcagctcggcgtcaaggcggtcgatgccacgacgctggaagtg
acgctggagcgcccgacgcccttcttcctcgaactgctcgcgcaccagacggcactgccg
gtctccaaggccagcgtcgagaagaacggcgcggatttcgtgaagcccggcgtgatggtc
tccaacggcgccttcaagctcgccagccatgtgccgaacgacaacctcgtcgtcgagaag
aacccgaactactgggatgccgccaacgtcaagctcgacaaggtcatcttctacccgatc
gacgaccaggccgcttcggtccgccgcttcgaagcgaaggaaatggacctcgtctacaac
ttctccgccgaccagatcgagcgcctgaaggcgagctatggcgagcaggtccacgtctcg
ccgacgcttgcgacctactactacgccttcgacacccgccaggagccctatagcgacgtt
cgcgtgcgccgggcactttccatggccgtcgaccgcgacttcctggccaaggaaatctac
tcgggctcgcagctcccggcctactccatggtgcccccgggcatggaaggctacgagccg
gcgaccgccgatttcggcgcgctctcccagctcgaccgcgaggacgaggcgctcaagctg
atgaaggaagccggctacggcgagggcggcaagccgctgaagatcgagatccgctacaac
accaacccgaaccacgagcgcgtggcgacggccgttgccgacatgtggaagaacaccttc
ggcgcggacgtctcgatggtgaatctcgacgtctcctcgcactacgcctacctgcaggaa
ggcggcgcgttcaacgtggcgcgggccggctgggtcgccgactatgcggatgcggagaac
ttcctggcgctcagcgtcagcaccaacaagaccttcaactacggcaagttcgagaatgcg
gaatacgacgcgctcatgaagcagtcctatgaggagcagggtccggcggcacgcgccaag
gtcctgcacgaggcggaagccctcctcatgaaggaacagccgatcgcgccgtttctgacg
caggccgacctgtggctcgtctccagcaaggttcagggctggcatgacaatgccgccaac
cagcacctgagccgcttcctcagcgtttcggaatga
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