Shinella sp. HZN7: shn_16405
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Entry
shn_16405 CDS
T04278
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K17202
erythritol transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_16405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_16405
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Erythritol transporter
shn_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ANH05463
UniProt:
A0A1A9G5A7
LinkDB
All DBs
Position
complement(3402081..3403028)
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AA seq
315 aa
AA seq
DB search
MFKKGMRVLFAATAALPLLFSTAWAEGLITVIVNDPSNPYWFTEGEVAKKTAESLGYTAN
VGAHKGDTNTESNLIDTAITNKSVAIILDPANADGSVGAVKKAVAAGIPVILVNAEINQE
GLAKAQLVSNNAQGAALGAQQWVEAVGDTGKYVELFGAPSDNNAATRSNGYETVLTQYPD
LEKVGREVADWDRTKGHAKMQSLLQANPDITGVISGNDEMALGAIAALKEAGKLEQVKVG
GFDGSPDAVAAIKAGELQYTVLQPVAVFSEAAVKQADNVIKTGSTGVDTEKQLFDCLLIT
KDNVDKYTAPFVLSE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaaggaatgcgtgtacttttcgctgcgaccgccgcgctgccgctgctgttc
agcacggcctgggccgaaggcctgatcaccgtcatcgtcaacgatccgtcgaacccctac
tggttcacggaaggcgaggtcgccaagaagacagcggaaagccttggctatacggccaat
gtcggcgcgcacaagggcgacaccaacaccgaaagcaacctgatcgacacggccatcacc
aacaagtcggtcgccatcatcctcgacccggcgaacgctgacggctccgtcggcgcggtc
aagaaggccgttgcggccggcatcccggtcattctcgtcaatgccgagatcaaccaggaa
ggtctcgccaaggcacagctcgtttcgaacaacgcccagggcgcagctctcggcgcgcag
cagtgggtcgaagcggtcggcgacacgggcaagtatgtcgagctcttcggcgctccctcg
gacaacaacgccgcgacgcgttcgaacggctatgaaaccgtgctgacccagtacccggac
ctggagaaggtcggccgtgaagtggccgactgggatcgcaccaagggccacgccaagatg
cagtccctgcttcaggcgaacccggacattaccggcgtgatcagcggcaatgacgaaatg
gcgctcggtgccatcgcggccctcaaggaagccggcaagctggaacaggtcaaggtcggc
ggcttcgacggttcgccggatgccgtcgccgccatcaaggcgggcgagctgcagtacacc
gtccttcagccggtcgccgtcttctcggaagccgccgtcaagcaggccgacaacgtgatc
aagaccggttcgaccggcgtcgacaccgaaaagcagctcttcgattgcctgctgatcacc
aaggacaatgtcgacaagtacaccgctccgttcgttctgagcgaataa
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integrated database retrieval system
