Shinella sp. HZN7: shn_16740
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Entry
shn_16740 CDS
T04278
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_16740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_16740
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
shn_16740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ANH06813
UniProt:
A0A1A9G910
LinkDB
All DBs
Position
complement(3474712..3476361)
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AA seq
549 aa
AA seq
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MKFQTLTAVAALMLSAAPAAAQTVLTVNIEPATTWVRNFNPFNQTSARQSTLDFIYEPLV
IFNQFDSNKPVYRLAESFTLSDDLKSIDFKLRSGLKWSDGQPLTAEDVKFSFDLVKRFPA
LDFVSIWTQIDGVEVADAETVRFTMKEPTSLAAETLVQIPIVPQHAWKDIADPVTFSNET
PVGSGPMTEIARFTGQTYDQCRNPNYWDAEQLKVDCMRFPQLADNNQILTATVDGTLDWG
VSFIPDIEKVYVAKNPEHFHYWYSPSSMVAFVFNQESANADNRKAFSDLKFRQAVSMALD
RQGMVDIAGYGYPTLNEDPGLMGELYKAWADPSVTTDFGKFATYDEAAAAALLDEAGYVD
KDGDGMRDNPDGTKIAFSIIVPASWTDWIDTVNIAIDNMKAVGIDARIETPEEAVWSQNL
ISGKFDAAINSLPAAASPYYPYKRAFTEADKGKTRFTAQRWFNADVEKLIGEFTHTADLA
KQKDIMNRAQRIVAENLPLMPVFNNPNWYQYNTSRFTGWSTKENPFANPSITRNNRARLL
NLLALQPVP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccagaccctgacggccgttgcggccctgatgctgagcgccgcgcccgcggct
gcccagaccgtgctgaccgtgaacatcgagcccgcgacgacgtgggtgcgcaactttaac
cccttcaaccagacgtccgcgcgccagagcacgctcgacttcatctatgagccgctggtc
atcttcaaccagttcgacagcaacaagccggtctatcgtcttgccgagagcttcacgctc
tccgacgacctgaagagcatcgatttcaagctgcgttccggcctgaaatggtccgacggc
cagccgctgaccgccgaggacgtgaagttcagcttcgacctcgtgaagagattcccggcg
ctcgacttcgtcagcatctggacgcagatcgacggtgtcgaggtggcggatgccgagacc
gtgcgcttcaccatgaaggagccgacctcgcttgccgccgaaacgctggtgcagatccct
atcgtgccgcagcatgcctggaaggacatcgccgatcccgtcaccttctccaacgagacg
ccggtcggcagcggtccgatgacggagatcgcccgcttcaccgggcagacctacgaccag
tgccgcaacccgaactactgggacgcagaacagctcaaggtcgactgcatgcgcttcccg
cagcttgccgacaacaaccagatcctgaccgcgacggtggacggcacgctcgactggggc
gtctccttcatccccgatatcgagaaggtctatgtcgccaagaacccggagcacttccac
tactggtattcgccgagcagcatggtggccttcgtcttcaaccaggaaagcgccaatgcg
gacaatcgcaaggccttttccgacctgaagttccgccaggccgtttccatggcgctcgac
cggcagggcatggtcgatatcgccggctacggctatccgacgctgaacgaggacccgggc
ctgatgggcgagctctacaaggcctgggccgatccgtccgtcaccaccgatttcggcaag
ttcgcgacctatgacgaggcggcagccgcggcgctgctcgacgaggccggttatgtcgac
aaggacggcgacggcatgcgcgacaaccccgacggcacgaagatcgccttctcgatcatc
gttccggcgagctggaccgactggatcgacaccgtcaacatcgccatcgacaacatgaag
gcggtcggcatcgatgcgaggatcgagacgccggaagaggccgtctggagccagaacctc
atctccggcaagttcgacgccgccatcaacagtctgccggccgcagcttcgccgtactat
ccctacaagcgcgccttcaccgaggccgacaagggcaagacgcgcttcaccgcgcagcgc
tggttcaatgcggatgtcgaaaagctgatcggggagttcacccacacggccgatctcgcc
aagcagaaggatatcatgaacagggcccagcgcatcgttgcggagaacctgccgctgatg
ccggtgtttaacaacccgaactggtatcagtacaatacgagccgcttcaccggctggtcg
acgaaggagaatcccttcgccaatccgtcgatcaccaggaacaatcgcgcacgtcttctg
aacctcctggctctccagccggttccgtga
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