Shinella sp. HZN7: shn_17060
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Entry
shn_17060 CDS
T04278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_17060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_17060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_17060
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
shn_17060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TAT_signal
ANF_receptor
UCR_Fe-S_N
Peripla_BP_4
HalD
Motif
Other DBs
NCBI-ProteinID:
ANH05578
LinkDB
All DBs
Position
3545803..3547083
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AA seq
426 aa
AA seq
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MLTRRDFLKTTAAGSAAALTSGLAMPALAQNAPVKLGYVSPQTGPLAAFGEADSFVIDSF
LAVAKSKGLNYEIVVKDSQSNPNRAAEVAKQLIVDDEVNLVLVASTPETTNPVATTCEAE
GMPCISTVAPWQPWFIGQQGNPGDPAAWKPFDYAYHFFWGLEDVIAVFTNMWAQVETNRK
VGGLFPNDGDGNAWGDKTVGFPPVLEKMGYALNDPGRYQNMTDDFSAQINAFKAGECEIV
TGVVIPPDFTTFWNQARQQGFLPKVASIGKALLFPQAVEALGAAGHNLSSEVWWSPSHPF
QSSLTGESSAEVAAAFTRATGRPWTQPIGFAHALFELAVDAINRAEDPTDGDAVAAAIAT
TRLDTLVGTIAWDGAGLPPFAAKNVAKTPLVGGQWRLKDGGGYDLVITDNKTAPAIPVGG
SMEAIA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgagacgcgatttcctgaagacgacggccgcaggcagcgccgccgccctgaca
tccggccttgccatgccggcattggcgcagaacgcgccggtcaagctcggctatgtgagc
ccgcagaccggcccgctcgccgccttcggcgaggccgacagcttcgtcatcgacagcttt
ctggcggtcgcgaaatcgaaggggctgaactacgagatcgtcgtcaaggacagccagtcg
aaccccaaccgcgcggcggaagtcgccaagcagctcatcgtcgacgacgaggtcaacctg
gtgctcgtcgcctcgacgccggagacgaccaatcccgtcgcaacgacctgcgaggcggag
ggcatgccctgcatctccaccgtcgcgccctggcagccgtggttcatcggacagcagggc
aatcccggcgatccggccgcctggaagcccttcgattatgcctatcacttcttctggggg
ctggaggacgtcatcgccgtcttcaccaacatgtgggcgcaggtggagaccaaccgcaag
gtcggcggcctcttccccaacgacggcgacggcaatgcctggggcgacaagaccgtcggc
ttcccgcccgtgctggagaagatgggctatgccctcaacgaccccggccgctaccagaac
atgaccgacgatttttccgcgcagatcaacgccttcaaggccggcgaatgcgagatcgtc
accggcgtcgtcatcccgccggacttcaccaccttctggaaccaggcgcggcagcagggt
ttcctgccgaaggtcgcctcgatcggcaaggcgctgctcttcccgcaggcggtggaggcg
ctcggcgcggccgggcacaacctttcctccgaagtctggtggtcgccgagccatccgttc
caatcctcgctgacgggtgaaagctcggccgaggtcgccgccgccttcaccagggcgacc
ggccggccgtggacgcagccgatcggcttcgcccacgcgctcttcgaactggcggtcgat
gcgatcaatcgcgccgaggacccgacggacggcgatgcggtggccgccgccatcgccacg
acacggctcgacacgctggtcggcaccatcgcctgggacggcgcgggcctgccgcccttc
gcggcgaagaacgtggccaagacgccactcgtcggcggccagtggcggctgaaggacggc
ggcggctacgacctcgtcatcaccgacaacaagacggcgccggccattcccgtcggtggt
tcgatggaagcgatcgcctga
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